| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1171 |
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| Symbol | |
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| ID | 8018815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1238835 |
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| End bp | 1242767 |
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| Gene Length | 3933 bp |
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| Protein Length | 1310 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829953 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_002981135 |
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| Protein GI | 241662775 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCG CCGAGCGCAA GCCCGGCGGC AATGCGCGTC CGCAGCGCCG CCAAAAGCCC
ACGCCGGAAG AACTCGCCGC AGCGCTGGAG GCACGCCGCG CGCGTGCCAA CCGTGTCCCG
CCGATCACGT TTCCCGAAGC GCTGCCCGTG TCAGCCAGGC GCGACGAAAT CGCCGAGGCC
ATCGCCGGCA ACCAGGTGGT GATCGTCTCG GGCGAAACCG GCTCGGGCAA GACCACGCAG
TTGCCGAAGA TCTGCCTGTC GATCGGGCGG GGCATTGGCG CGGGCGGTAC CGGGCTGATC
GGCCATACGC AGCCGCGCCG GATTGCAGCG ACGTCTACGG CCAAGCGCAT CGCGCAGGAG
ATCGGCACGC CAGTGGGCGA GCACGTGGGC TTCCAGGTGC GCTTTAACGA CACGCTGTCG
GCTGGGGCGT CGGTCAAGCT CATGACCGAC GGCATCTTGC TGGCCGAGAC GCAGAACGAT
CCACTGCTGC GCGCTTACGA CACGATCATC ATCGACGAGG CGCACGAACG CAGCCTCAAC
ATCGACTTTC TGATCGGCTA TCTCAAGCAG CTTTTGCCGC GCCGGCCCGA CCTGAAGGTC
ATCATCACCT CGGCGACCAT CGACGCGCAG CGGTTTGCCG AGCACTTTGC TGGCCCGAAG
GGGCCGGCGC CCGTCATTGA AGTCAGCGGC CGGTTGTATC CGGTCGAAGT GCGCTACCGC
CCGATCCAGC GCGACGAGAA GGACAAGGAG CGCGATCTTT ACGAAGCGCT CGTCGATGCG
GTGGACGAAC TCGCCCGCGA AGGCCCGGGC GACGTGCTGA TCTTCCTGCC CGGCGAGCGC
GAGATTCGCG AGGCGGCCGA GGCGCTGCGC AAGCACCATC CGGCGCATAC CGAGATCCTG
CCGCTCTTTG CGCGCTTGTC CGTGCAGGAA CAGGAACGTG TGTTCCGGCC GTCCAACGCG
CGGCGCATCG TGCTGGCGAC CAACGTGGCT GAGACCTCGC TGACGGTGCC GGGCATTCGC
TACGTGGTCG ATACGGGGCT GGCGCGCGTG AAGCGCTATT CGTATCGCAA CAAGGTCGAG
CAATTGCAGA TTGAGCCAGT GTCGCAGGCC GCAGCCAACC AGCGCGCCGG CCGTTGCGGC
CGGGTGGCCG ATGGCGTCTG CATCCGCTTG TATGAAGAAG CGGATTTCAT TGCACGGCCG
CGTTTTACCG ATCCGGAAAT CCTGCGTTCG TCGCTCGCCG CTGTCATCCT GCGCATGAAG
GCGCTGCGAT TGACAGACGT TGAGCAGTTT CCCTTCATCG AGCCGCCGCT AGGCCGTGCA
ATTGCCGACG GCTACCAGCT CCTGCAAGAA CTCGGGGCGG TCGACGACGA AAACGCGCTG
ACCCCGCTGG GCAGGCAGGT GGCCCGGCTG CCGCTGGACC CGCGGGTGGC GCGGATGATC
CTGGCAGGCC GCGACCACCA ATGTCTGCGC GAGATGCTGA TCATCGCGAG CGCCTTGTCC
GTTCAGGACC CGCGCGAGCG CCCGCAGGAA CTGCAACAGC AGGCCGATCA GGCGCACCGG
CAGTTCGCCG ACGAAAAATC GGAATTCCTC GGCTGGGTGA AGCTGTGGAA GTGGTTTGAA
GAGGCCATCG CGCACAAGAA ATCGAACAAA CAATTGCAGG ACCAGTGCCG CTCGCACTTC
CTGTCGCATG TGCGGTTGCG CGAATGGCGC GACGTGCATT CGCAGTTGCA TACCACGGTG
GCGGAGCAGG GCTGGAAGCT CAACGAATCC GATCCGACGT ATGAGCAGTT ACACCTGGCG
TTGCTGACGG GCTTGCTCGG TAACATCGGA GTGCGCATCG AGGAGGCAGA CGGAAAAGGC
CGCGAATACC TCGGCGCGCG CGGCATCAAG TTCTTCCTGT GGCCGGGTTC GGTCATCGCG
CGCAAGGCCG GCAAGTGGGT CGTGGCAGGC GAGTTGGTCG AGACCAGCCG CCTGTTCGGC
CGCACGCTGG CGCGCATCGA GCCGGAATGG GTGGAAAAGG TCGGCGTGCA CCTGTTGAAG
GTGTCGTGGA GCGATCCGCA TTGGGAAAAG AAGGCCGGCC AGGTGATGGC CTTCGAGCGG
GGCACGCTGT ACGGGCTGCC GATCTATCAA CAGCGCCGTG TGCACTTCGG GCCGATGCAG
CCGAAGGAGG CGCGCGAGAT GTTCATTCGC CGCGCGCTGG TCGATGGCGA GTTCGAAACG
CGCCTGCCGT TCTTCACGCA CAACCAGCGC CTGGTGCGCG AGATCGAAAA CCTCGAACAC
AAGTCACGCC GACAAGACGT GCTGGTGGAC GACGAACTGA TCTACGCGTT CTACGACAGC
CAGATCCCAG CGGACATTTA CAACACCGTG TCGTTTGAGC GCTGGTATGC CGAGGCCGCC
AGCGCGGGCG GCAAAAGCGG CCAGAAGCTG CTGTACCTGA ATCGCGATGA CCTCATGCGG
CATGAGGCGG CCGGCATCAC GACCGACCTG TTCCCGAAGG TGCTGCCGAT TGCCGGCATC
GACATGGGCC TGACGTATCA CTTCGAGCCC GGCAGCCCCC GCGATGGCGT GACGCTCACC
GTGCCGCTGT ATGCGCTCAA CCAGGTGCCC GCGCAGCGCA CTGAATGGCT GGTGCCGGGC
ATGCTCAAGG AGAAGGTGCA TCTGTTGCTG AAGAGTCTGC CGCAGAAGCT GCGCCGCCAT
TGCGTGCCGT TGCCAGACTA TGCCGCCGGA TTCGTGTCGC GCGTGCGGTT GGGCGATGGC
GACCTGCTCG ACCGCTTGAT TGCCGACGTG CGCGAGCAGA CTGGCATCGC CCTCAAGCGC
GCCGACTTCA AGCTCGAGAC GCTGCCCGCG CATCATTTCA TGAACTTCAA GGTGATCGAC
GAGCACGGTC GCCAGCTAGA CATGGGGCGC AATCTGGCCC AGTTGCGGGC GGAACTCGGC
GGCCGCGCGC AGCAGACGTT CCAGTCGATC GCGGCACAGG ATGCTGCCGT GGCCGGTGCC
CAGAACGACG GCGCCCAGCC GGGAAAGGCA GGTAAGAGCG GCAAATCGGA AGCGCCGGCC
AACGCCGCGC TGTACTCGGG CCTGACGACG TGGAACTTCG GCGAGTTGCC GGAACTGCTG
GAAGTCCGCA AGGGCAACCA GACGCTGTTC GGCTATACGG CGCTCGTCGA TGCCGGCGAC
CACTGCGATG TGGAAGTCTT CGACGATCCG GCGGAAGCTG CGCGCATCCA TCGTCTGGGC
TTGCGACGGC TGTTTGCGAT CCAGCTGCGC GAGCCGTTGA AATACCTGGA AAAAAACATC
CCGGGCCTGT CGCAGATGGC CATCCAGTTC ATGAACCTCG GCACACAGGA CGATCTGCGC
GACCAGATTC TGGATGCCAC GCTGGAGCGC GCCTGCCTGC AAGACCCGCT GCCCACCGAT
GACGCCAGCT TCGGTGCCCG CAAGGACGAA AGCCGCGCGC GGCTGACGTT GCTGGCACAG
GAGATTGCGC GGCTCGTCGG TGCCATCCTG GCCGAATACG CGCAACTGCC GCGCAAGCTG
CAGATCGCCA AGCCGTTTGC TACGGCCACC GCCGATATCG ACGCACAGCT CAGGACGTTG
ATGCACAAGC GCTTCATCGA GGCGACGCCG TATGCGCAGT TGACGCACTT CCCGCGCTAC
CTGAAGGGCA TCGCGCTGCG CATTGACAAG CTCAAGGCGG ACCCGGCGCG CGACACGCAG
CGCATGCAGG AAATGGCGCC GCTCATCCAG CAATACCAAC GCGCGGAAAA GGCGCTGCGC
GTGCAAGGGC AGGGCGGCAG CGACCCGCGC ATGGAGGAAT TCCGCTGGAT GCTCGAGGAG
TTGCGCATCG CGCTGTTTGC ACAGGAACTG CGCACGCCGG TGCCGATGTC GGTCAAACGG
CTGCAGAAGG TGTGGGAATC GATGCAGCGA TAG
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| Protein sequence | MPPAERKPGG NARPQRRQKP TPEELAAALE ARRARANRVP PITFPEALPV SARRDEIAEA
IAGNQVVIVS GETGSGKTTQ LPKICLSIGR GIGAGGTGLI GHTQPRRIAA TSTAKRIAQE
IGTPVGEHVG FQVRFNDTLS AGASVKLMTD GILLAETQND PLLRAYDTII IDEAHERSLN
IDFLIGYLKQ LLPRRPDLKV IITSATIDAQ RFAEHFAGPK GPAPVIEVSG RLYPVEVRYR
PIQRDEKDKE RDLYEALVDA VDELAREGPG DVLIFLPGER EIREAAEALR KHHPAHTEIL
PLFARLSVQE QERVFRPSNA RRIVLATNVA ETSLTVPGIR YVVDTGLARV KRYSYRNKVE
QLQIEPVSQA AANQRAGRCG RVADGVCIRL YEEADFIARP RFTDPEILRS SLAAVILRMK
ALRLTDVEQF PFIEPPLGRA IADGYQLLQE LGAVDDENAL TPLGRQVARL PLDPRVARMI
LAGRDHQCLR EMLIIASALS VQDPRERPQE LQQQADQAHR QFADEKSEFL GWVKLWKWFE
EAIAHKKSNK QLQDQCRSHF LSHVRLREWR DVHSQLHTTV AEQGWKLNES DPTYEQLHLA
LLTGLLGNIG VRIEEADGKG REYLGARGIK FFLWPGSVIA RKAGKWVVAG ELVETSRLFG
RTLARIEPEW VEKVGVHLLK VSWSDPHWEK KAGQVMAFER GTLYGLPIYQ QRRVHFGPMQ
PKEAREMFIR RALVDGEFET RLPFFTHNQR LVREIENLEH KSRRQDVLVD DELIYAFYDS
QIPADIYNTV SFERWYAEAA SAGGKSGQKL LYLNRDDLMR HEAAGITTDL FPKVLPIAGI
DMGLTYHFEP GSPRDGVTLT VPLYALNQVP AQRTEWLVPG MLKEKVHLLL KSLPQKLRRH
CVPLPDYAAG FVSRVRLGDG DLLDRLIADV REQTGIALKR ADFKLETLPA HHFMNFKVID
EHGRQLDMGR NLAQLRAELG GRAQQTFQSI AAQDAAVAGA QNDGAQPGKA GKSGKSEAPA
NAALYSGLTT WNFGELPELL EVRKGNQTLF GYTALVDAGD HCDVEVFDDP AEAARIHRLG
LRRLFAIQLR EPLKYLEKNI PGLSQMAIQF MNLGTQDDLR DQILDATLER ACLQDPLPTD
DASFGARKDE SRARLTLLAQ EIARLVGAIL AEYAQLPRKL QIAKPFATAT ADIDAQLRTL
MHKRFIEATP YAQLTHFPRY LKGIALRIDK LKADPARDTQ RMQEMAPLIQ QYQRAEKALR
VQGQGGSDPR MEEFRWMLEE LRIALFAQEL RTPVPMSVKR LQKVWESMQR
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