Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1165 |
Symbol | |
ID | 8018809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1233462 |
End bp | 1234214 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829947 |
Product | RNA methyltransferase, TrmH family, group 3 |
Protein accession | YP_002981129 |
Protein GI | 241662769 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0693312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGT CCAAGCTCCT TATCGGCTTT CATGCCGTTA CCGCCCGACT GCGCCACGGC GCCAAGTCGA TCGACGAAAT CTACTTCGAG GCCAACCGCC GCGACCGCCG CATGCAGGAT TTCCTGAAAG CGGCGGAAGC AGCGGGCGTG CGCCTCATCC CCGCCGACGC TGATCGCCTG CGCGGCATTG CCGGCACTGA TCGCCACCAG GGCGTGGTTG CCAAGGCAGA GTCGCTGTCG CTGGCGCTCA ATCTTGATGA ACTGCTCGAC GGCATCGAGG GCACGCCGCT GCTGCTGGTG CTCGACGGTG TGACCGATCC GCATAACTTA GGTGCTTGCC TGCGAGTGGC CGATGCGGCT GGCGCGCACG CCGTGATTGC GCCGAAGGAC CGTAGCGTCG GGATCAACAC GACGGTCGCC AAGGTGGCCA GTGGCGCTGC CGAAACCGTC CCATACATCA CCGTGACCAA CCTGGCGCGT ACGCTGCGCG AGTTGCAGGA GCGCGGCGTA TGGGTGATCG GCACGGCGGA CGAAGCCGAG CAGGATCTCT ATCAGGCAGA CTTCAAGGGT CCCATCGCCA TTGTGATGGG TGCCGAAGGC GAAGGCATGC GCCGGCTCAC GCGTGAGACC TGCGACGCGC TGGTCAGCAT TCCGATGGCC GGCAGCGTGG AAAGCCTGAA CGTGTCGGTG GCCAGTGGCG TGTGCCTGTT CGAAGCGGTA CGCCAACGCG CGGCGGCACC TGCCAAGAAG TAA
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Protein sequence | MSKSKLLIGF HAVTARLRHG AKSIDEIYFE ANRRDRRMQD FLKAAEAAGV RLIPADADRL RGIAGTDRHQ GVVAKAESLS LALNLDELLD GIEGTPLLLV LDGVTDPHNL GACLRVADAA GAHAVIAPKD RSVGINTTVA KVASGAAETV PYITVTNLAR TLRELQERGV WVIGTADEAE QDLYQADFKG PIAIVMGAEG EGMRRLTRET CDALVSIPMA GSVESLNVSV ASGVCLFEAV RQRAAAPAKK
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