Gene Rpic12D_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1162 
Symbol 
ID8018805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1228261 
End bp1229601 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content63% 
IMG OID644829943 
Productadenylosuccinate synthetase 
Protein accessionYP_002981126 
Protein GI241662766 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.502883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC CAGCAGTGAG CCAAGGACGC AATGTCGTCG TCATCGGCAC CCAGTGGGGT 
GACGAAGGTA AAGGGAAAAT CGTCGATTGG CTGACCGATC ATGCGCAAGG CGTGGTTCGT
TTCCAGGGCG GACATAACGC AGGCCATACC CTCATCATCG GCGGTAAGAA GACGATTCTG
CGTCTGATCC CGTCGGGCAT CATGCGCGAC GGCGTCGCGT GCTACATCGG CAACGGTGTC
GTGCTGTCGC CTGAGGCGCT GTTCAAGGAA ATCGACGAGT TGGAAACGGC CGGCGTGCAA
GTGCAGAACC GCTTGCGCAT TTCGGAAGCG ACCAACCTGA TCCTGCCGTA CCACGTGGCC
ATCGACAAGG CGCGCGAAGC CAAGCGCGGC GCCGCCAAGA TCGGCACCAC AGGCCGCGGT
ATTGGCCCGG CATATGAAGA CAAGGTAGCC CGCCGCGCGC TGCGCGTACA GGATCTGTTC
GACCCGGCTT ACTTTGCCGA GCGTCTGCGC GAAAACCTGG ATTTCCACAA TTTCGTCCTG
ACGCAGTACC TGAATCACCC GGCGCTGGAT TTCCAGCAGA CGCTCGACGA AATGCTGTCG
TATGCAGACC GCCTCGCCCC GATGGTCACG GACGTGTCGG CCGAGCTGTT TGCCGCCAAC
GCTGCCGGCA AGAACCTGAT GTTCGAAGGC GCGCAAGGCA CGCTGCTCGA TATCGACCAT
GGTACCTACC CGTTCGTGAC GTCGAGCAAC TGCGTGGCGG GCAATGCCGC TGCGGGGGCT
GGCGTCGGCC CGGGCCAACT GCATTACATT CTTGGCATCA CCAAGGCGTA TTGCACGCGC
GTGGGTTCGG GGCCGTTCCC GAGCGAGCTG TATGACGCGG ACAATCCCGC GCGCCAAGAC
CCGATCGGCG TGCGTCTGGC CAATGTCGGC AAGGAATTCG GCTCGGTCAC GGGCCGCCCG
CGCCGCACGG GCTGGCTGGA TGCCGCCGCG CTGCGTCGCG CGATCCAGAT CAACGGCGTG
TCGGGCCTGT GCATGACCAA GCTCGATGTG CTGGATGGCC TGGAAACGCT CAAGCTTTGC
GTGGGCTACA TGCTCGACGG CAAGCAAATC GACATCCTGC CGCGCGGCTC CGATGCCGTG
GCGCGTTGCC AGCCGATCTA CGAAGAATTC CCGGGCTGGA ACACGTCGAC CTTCGGCCTG
AAGGAGTGGG ATGCGCTGCC CGAAACCGCA CGGGCTTACC TGAAGCGCGT CGAAGAAGTG
GCGGGTATTC CGATCGCCAT GATCTCGACC GGCCCCGACC GCGACGAGAC CATCCTGCTG
CGTCATCCCT ACAAGGACTG A
 
Protein sequence
MSAPAVSQGR NVVVIGTQWG DEGKGKIVDW LTDHAQGVVR FQGGHNAGHT LIIGGKKTIL 
RLIPSGIMRD GVACYIGNGV VLSPEALFKE IDELETAGVQ VQNRLRISEA TNLILPYHVA
IDKAREAKRG AAKIGTTGRG IGPAYEDKVA RRALRVQDLF DPAYFAERLR ENLDFHNFVL
TQYLNHPALD FQQTLDEMLS YADRLAPMVT DVSAELFAAN AAGKNLMFEG AQGTLLDIDH
GTYPFVTSSN CVAGNAAAGA GVGPGQLHYI LGITKAYCTR VGSGPFPSEL YDADNPARQD
PIGVRLANVG KEFGSVTGRP RRTGWLDAAA LRRAIQINGV SGLCMTKLDV LDGLETLKLC
VGYMLDGKQI DILPRGSDAV ARCQPIYEEF PGWNTSTFGL KEWDALPETA RAYLKRVEEV
AGIPIAMIST GPDRDETILL RHPYKD