Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1158 |
Symbol | |
ID | 8018801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1224313 |
End bp | 1225740 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829939 |
Product | HflK protein |
Protein accession | YP_002981122 |
Protein GI | 241662762 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTT ACTTCTCCAT AGTCAGACAA TCAGGACAAG CCCGACCGCT CATGCCCGAG ATTTCGACCC AGTCTTCTTC CATGGCCTCG CCGCGTCCGG CGCGAGGTTT GTGGCACCGC TTGCGTGTGC TGCTTTCGCT GAACGATCCG CGCTGGGGTC GCGGCGATGA CAACAACGCC GAGCGCGAAG ACAAAGACGA ACCAAAGCGT CAAAGCAAGC CGCCCCAGGA TGGCCCGCCC GACCTTGACG AGTTGTGGCG CGACTTCAAT CGCCGCCTGA ACAACCTGTT CGGCCGCAAG GACAGCGGTA ACGGTAGCGA CGGCCCCACG CCGCTGCGTC CGGGTAACGG CCGCGGTGGC TCTGGCTTGG GTGTCGGCGT CCTGCTAGCA GTGCTCGTGG GCCTGTGGCT GGCCAGCGGT TTCTTTATCG TGCAGGAAGG CCAGACGGGC GTGATCCTGC AGTTCGGCCG TTTCAAGTAC CTTGCAACGC CGGGTATCAA CTGGCGTCTG CCGTATCCGG TCGAATCGCA CGAAATCGTG AACCTGTCAG GTGTGCGCAC GCTTGAAATC GGTCGGACGA CCCAGATCAA GGACACGAAC CTGAAAGATT CCTCGATGCT CACGCAGGAC GAGAATATCG TCGACGTGCG CTTCTCGGTC CAGTACAACA TTGCCAATCC GGTCGATTAC TTGTTCTACA ACCGTACGGA CCGCGGCGGC GATGAAGAAT TGGTGACACA GGCGGCCGAG ACGTCGGTGC GCGAGATCGT CGGTCGCAAC AAGATGGATG CGGTGCTGTA CGAAGGTCGA GATGCGGTTG GCCGCAATCT CGCGGAATCG ATTCAACGCA TCCTGTCGGC TTACAAGACC GGCATCCGCA TCCTCAGCGT CAACGTGCAG AGCGTGCAGC CGCCGGAGCA GGTGCAGGCC GCGTTCGATG ATGTGACCAA GGCGGGCCAG GACCGCGAGC GAGCCATCTC CGAGGGGCAG GCTTATGCCA ACGACGTGGT GCCGCGTGCC AAAGGTACGG CAGCCCGTCT GGGTGAAGAG GCGCAAGGCT ACAAGGCACG CGTCATCGCT CGTGCAGAAG GTGACGCGGC CCGCTTTGCC TCGGTGCAGC GCGAGTACGC AAAGGCGCCG CAGGTTACGC GCGACCGCAT TTATCTGGAA ACCATGCAAG ACATTTACGC CAATTCGACG AAAGTCTTGG TCGACCAGAG CAATGGCAGC CTCTTGTATT TGCCGCTGGA CAAGCTGATC GCGCAAACGC AGGGCGACAC CTCCCGCCCG GCAGCGGCGC CTGGCGCCTC AGCGCAGGAC AGCGGTTCTG CGCAGGGCGT ACCGACTCCC TCCAATCCGT CACCGGCCAA TGACGCAGAC TCGCGCTCGC GCGAAGCACT GCGCAACCGT GACCGCGATT CGCGCTAA
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Protein sequence | MARYFSIVRQ SGQARPLMPE ISTQSSSMAS PRPARGLWHR LRVLLSLNDP RWGRGDDNNA EREDKDEPKR QSKPPQDGPP DLDELWRDFN RRLNNLFGRK DSGNGSDGPT PLRPGNGRGG SGLGVGVLLA VLVGLWLASG FFIVQEGQTG VILQFGRFKY LATPGINWRL PYPVESHEIV NLSGVRTLEI GRTTQIKDTN LKDSSMLTQD ENIVDVRFSV QYNIANPVDY LFYNRTDRGG DEELVTQAAE TSVREIVGRN KMDAVLYEGR DAVGRNLAES IQRILSAYKT GIRILSVNVQ SVQPPEQVQA AFDDVTKAGQ DRERAISEGQ AYANDVVPRA KGTAARLGEE AQGYKARVIA RAEGDAARFA SVQREYAKAP QVTRDRIYLE TMQDIYANST KVLVDQSNGS LLYLPLDKLI AQTQGDTSRP AAAPGASAQD SGSAQGVPTP SNPSPANDAD SRSREALRNR DRDSR
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