Gene Rpic12D_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1158 
Symbol 
ID8018801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1224313 
End bp1225740 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content62% 
IMG OID644829939 
ProductHflK protein 
Protein accessionYP_002981122 
Protein GI241662762 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTT ACTTCTCCAT AGTCAGACAA TCAGGACAAG CCCGACCGCT CATGCCCGAG 
ATTTCGACCC AGTCTTCTTC CATGGCCTCG CCGCGTCCGG CGCGAGGTTT GTGGCACCGC
TTGCGTGTGC TGCTTTCGCT GAACGATCCG CGCTGGGGTC GCGGCGATGA CAACAACGCC
GAGCGCGAAG ACAAAGACGA ACCAAAGCGT CAAAGCAAGC CGCCCCAGGA TGGCCCGCCC
GACCTTGACG AGTTGTGGCG CGACTTCAAT CGCCGCCTGA ACAACCTGTT CGGCCGCAAG
GACAGCGGTA ACGGTAGCGA CGGCCCCACG CCGCTGCGTC CGGGTAACGG CCGCGGTGGC
TCTGGCTTGG GTGTCGGCGT CCTGCTAGCA GTGCTCGTGG GCCTGTGGCT GGCCAGCGGT
TTCTTTATCG TGCAGGAAGG CCAGACGGGC GTGATCCTGC AGTTCGGCCG TTTCAAGTAC
CTTGCAACGC CGGGTATCAA CTGGCGTCTG CCGTATCCGG TCGAATCGCA CGAAATCGTG
AACCTGTCAG GTGTGCGCAC GCTTGAAATC GGTCGGACGA CCCAGATCAA GGACACGAAC
CTGAAAGATT CCTCGATGCT CACGCAGGAC GAGAATATCG TCGACGTGCG CTTCTCGGTC
CAGTACAACA TTGCCAATCC GGTCGATTAC TTGTTCTACA ACCGTACGGA CCGCGGCGGC
GATGAAGAAT TGGTGACACA GGCGGCCGAG ACGTCGGTGC GCGAGATCGT CGGTCGCAAC
AAGATGGATG CGGTGCTGTA CGAAGGTCGA GATGCGGTTG GCCGCAATCT CGCGGAATCG
ATTCAACGCA TCCTGTCGGC TTACAAGACC GGCATCCGCA TCCTCAGCGT CAACGTGCAG
AGCGTGCAGC CGCCGGAGCA GGTGCAGGCC GCGTTCGATG ATGTGACCAA GGCGGGCCAG
GACCGCGAGC GAGCCATCTC CGAGGGGCAG GCTTATGCCA ACGACGTGGT GCCGCGTGCC
AAAGGTACGG CAGCCCGTCT GGGTGAAGAG GCGCAAGGCT ACAAGGCACG CGTCATCGCT
CGTGCAGAAG GTGACGCGGC CCGCTTTGCC TCGGTGCAGC GCGAGTACGC AAAGGCGCCG
CAGGTTACGC GCGACCGCAT TTATCTGGAA ACCATGCAAG ACATTTACGC CAATTCGACG
AAAGTCTTGG TCGACCAGAG CAATGGCAGC CTCTTGTATT TGCCGCTGGA CAAGCTGATC
GCGCAAACGC AGGGCGACAC CTCCCGCCCG GCAGCGGCGC CTGGCGCCTC AGCGCAGGAC
AGCGGTTCTG CGCAGGGCGT ACCGACTCCC TCCAATCCGT CACCGGCCAA TGACGCAGAC
TCGCGCTCGC GCGAAGCACT GCGCAACCGT GACCGCGATT CGCGCTAA
 
Protein sequence
MARYFSIVRQ SGQARPLMPE ISTQSSSMAS PRPARGLWHR LRVLLSLNDP RWGRGDDNNA 
EREDKDEPKR QSKPPQDGPP DLDELWRDFN RRLNNLFGRK DSGNGSDGPT PLRPGNGRGG
SGLGVGVLLA VLVGLWLASG FFIVQEGQTG VILQFGRFKY LATPGINWRL PYPVESHEIV
NLSGVRTLEI GRTTQIKDTN LKDSSMLTQD ENIVDVRFSV QYNIANPVDY LFYNRTDRGG
DEELVTQAAE TSVREIVGRN KMDAVLYEGR DAVGRNLAES IQRILSAYKT GIRILSVNVQ
SVQPPEQVQA AFDDVTKAGQ DRERAISEGQ AYANDVVPRA KGTAARLGEE AQGYKARVIA
RAEGDAARFA SVQREYAKAP QVTRDRIYLE TMQDIYANST KVLVDQSNGS LLYLPLDKLI
AQTQGDTSRP AAAPGASAQD SGSAQGVPTP SNPSPANDAD SRSREALRNR DRDSR