| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1151 |
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| Symbol | ispG |
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| ID | 8018794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1216268 |
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| End bp | 1217554 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829932 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_002981115 |
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| Protein GI | 241662755 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.896437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.550837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCT CCACACCTCT CGATTGCGCT CCAGCCTTGG TGGGCCCGCT GCCGCGCCGG
AACTCGCGCG CCGCGCAAAT CCGCTGGGGT GATCGTGTTG TGCACGTCGG TGGCGACGCG
CCGGTCTGCG TGCAATCGAT GACGAATACC GACACGTCGG ACGCCATCGG TACCGCAATC
CAGGTAAAGG AACTGGCGCG AGCGGGCTCT GAGTTGGTGC GCATCACAGT GGATACCCCG
GCTGCTGCGG CCGCGGTGCC GGCCATCCGA GAGCAGCTCG ACCGCATGGG TGTGGATGTG
CCGCTGGTCG GCGATTTCCA TTACAACGGC CACAAGCTGC TGCAGGACTA TCCGGAGTGC
GCGCAGGCGC TATCCAAGTA CCGGATCAAC CCGGGCAACG TCGGGCAAGG TGCCAAGCGC
GACACGCAGT TTGCGCAGAT GATCGAGATC GCCTGCCGCT ACGACAAGCC GGTGCGTATC
GGGGTGAACT GGGGCAGCCT TGACCAAGAT CTGCTTGCGC GCATCATGGA CGAGAACGCG
CAACGTGCAA CCCCCTGGGA TGCCCGCGCC GTGATGGTCG AGGCGCTGAT CACCTCCGCG
ATCCAGTCCG CGCAGAAGGC TGAAGAACTG GGCTTGCCAG GCAGCCAGAT CATCCTGTCG
TGCAAGGTGT CGGCGGTGCA GGATCTGATT GCTGTGTACC GCGAGCTGGC GCGTCGCTGC
AATTACGCGC TGCACCTGGG CCTGACCGAG GCCGGCATGG GGAGCAAGGG TATCGTCGCT
TCCACGGCGG CGTTGTCAGT GCTGCTGCAG GAAGGCATCG GCGACACGAT CCGCATTTCG
CTCACGCCGG AACCGGGTGC GCCGCGCGAG AAGGAAGTCA TCGTCGCGCA AGAGATTCTG
CAGACCATGG GCCTGCGCAA TTTCACGCCC ATGGTGATCG CGTGCCCGGG TTGTGGGCGC
ACGACCAGCA CGGTGTTCCA GGAACTCGCG GCGCGCATCC AGTCGTATTT GCGCGAGCAG
ATGCCGGTGT GGAAGGAGCA GTACCCCGGC GTCGAAGAGA TGAATGTGGC CGTGATGGGC
TGCATCGTCA ACGGCCCCGG AGAGAGCAAG CACGCCAATA TCGGCATTTC GCTGCCAGGC
ACGGGCGAGT CGCCGGCGGC GCCGGTTTTC GTTGATGGCG TGAAGGTGAA AACGTTGCGC
GGCGAGCGCA TCACAGAAGA ATTCCAGGCG ATCGTCGACG AGTACGTGCG GACGCATTAC
GGCGCACAGA CTCCGGCGGC GGTCTAA
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| Protein sequence | MEISTPLDCA PALVGPLPRR NSRAAQIRWG DRVVHVGGDA PVCVQSMTNT DTSDAIGTAI
QVKELARAGS ELVRITVDTP AAAAAVPAIR EQLDRMGVDV PLVGDFHYNG HKLLQDYPEC
AQALSKYRIN PGNVGQGAKR DTQFAQMIEI ACRYDKPVRI GVNWGSLDQD LLARIMDENA
QRATPWDARA VMVEALITSA IQSAQKAEEL GLPGSQIILS CKVSAVQDLI AVYRELARRC
NYALHLGLTE AGMGSKGIVA STAALSVLLQ EGIGDTIRIS LTPEPGAPRE KEVIVAQEIL
QTMGLRNFTP MVIACPGCGR TTSTVFQELA ARIQSYLREQ MPVWKEQYPG VEEMNVAVMG
CIVNGPGESK HANIGISLPG TGESPAAPVF VDGVKVKTLR GERITEEFQA IVDEYVRTHY
GAQTPAAV
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