| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1149 |
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| Symbol | |
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| ID | 8018792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1214345 |
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| End bp | 1215142 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829930 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_002981113 |
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| Protein GI | 241662753 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.588418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.518826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT GGTCGACTGC TGTCAGTCTG GTCTTTATGC TGGCAGCCGC CGGGTGCGCA
TTGTCGCCGC CGGTCCAGAC TCAGACACGA GAAGTGACAA CCGTCCCCGA ACAAAAGGCC
GACGTCGGTC GTCGGGCGGC GATCCGATTG CAACTCGCGA CGCAATACCT GGAAGCCGGC
CAGAGTGCGA CAGCGCTTGA GGAAATCAAG AATGCCATCG CGATCGATCC GAGCGTCCCG
AACGCGTATC ACATTCGCGC GCTGGCTTAC ATGAACCTGG GCCAACGCGA GCAGGCGGAT
GAGAGTTTTC GCAGCGCTCT GGCGGCAACG CCGCAAGATG GAGACCTGCT GAACAACTAC
GGCTGGTTCC TGTGCTCGCA AGGCGGCAAG CCGGATCAAG GCATGGCGAT GCTGCGCCAG
GCCATTGAGG CGCCGGCCGC CGGCAGCCCC GCCAAACCGT GGACGAACCT GGGCGTTTGC
CAGATGCGTC AGGGCGATCT GGAGGGCGCG GAGAAGAGCC TGACGCGCGC TACCTACATC
GACGCAAACA ATTCGCTGAC CAACCTGACA TTGGCGCAGC TGTACTACAA ACGCCGCGAA
TATTCGCGTG CCATGCCGTT TATCGAGCGT GTGAATGGCC GCGGCAATCC GACGGCAGAA
AGCCTATGGC TGGGCGCGCG CATCGCGCGG CGCCTCGGCG ACACTTCGCA GCAGAACGCA
TGGAGCGCGC AATTGCAGCG CCGCTTCCCC AATGCGCCCG AAGAGGCGGC ATTCGAACGA
GGAGCCTGGG ATGACTGA
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| Protein sequence | MKRWSTAVSL VFMLAAAGCA LSPPVQTQTR EVTTVPEQKA DVGRRAAIRL QLATQYLEAG
QSATALEEIK NAIAIDPSVP NAYHIRALAY MNLGQREQAD ESFRSALAAT PQDGDLLNNY
GWFLCSQGGK PDQGMAMLRQ AIEAPAAGSP AKPWTNLGVC QMRQGDLEGA EKSLTRATYI
DANNSLTNLT LAQLYYKRRE YSRAMPFIER VNGRGNPTAE SLWLGARIAR RLGDTSQQNA
WSAQLQRRFP NAPEEAAFER GAWDD
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