Gene Rpic12D_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1147 
Symbolndk 
ID8018790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1212729 
End bp1213154 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID644829928 
Productnucleoside diphosphate kinase 
Protein accessionYP_002981111 
Protein GI241662751 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.18828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.662914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG AACGCACTTT GTCGATTATC AAACCGGATG CCGTGGCCAA GAATGTCATC 
GGCCAGATCT ACGCCCGCTT CGAAGGTGCC GGCCTGAAGA TCGTCGCAGC CAAGATGATC
CACCTGTCGC GCGCTGAAGC CGAACAGTTC TACGCTGTGC ACAAGGAGCG CCCGTTCTTC
AAGGACCTGG TGGACTTCAT GATCTCGGGC CCGGTGATGG TGCAGGCGCT GGAAGGCGAA
AACGCAATCG CCAAGAACCG TGACCTGATG GGCGCAACCG ATCCGAAGAA GGCTGAGAAG
GGCACGATCC GCGCCGACTT CGCTGACAGC ATCGACGCCA ACGCCGTGCA TGGTTCGGAC
GCAGCTGAAA CGGCTGCCGT GGAAGTAGCC TTCTTCTTCC CGGGCCTGAA CATTTACAGC
CGCTAA
 
Protein sequence
MALERTLSII KPDAVAKNVI GQIYARFEGA GLKIVAAKMI HLSRAEAEQF YAVHKERPFF 
KDLVDFMISG PVMVQALEGE NAIAKNRDLM GATDPKKAEK GTIRADFADS IDANAVHGSD
AAETAAVEVA FFFPGLNIYS R