| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1143 |
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| Symbol | |
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| ID | 8018786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1208018 |
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| End bp | 1209154 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829924 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_002981107 |
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| Protein GI | 241662747 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.420164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC AGAAAGCCGC CACGCCCGTC ACCCCCGCCG ATGACAACAT CGACGCTGCT
GTAGAGGGCC AGCGCACCCC AAACGGGCGC GCGGGGCGGC GTGCGCGCGG TGCGGCACAG
CCTCCTGCTG AAGAGATCGA AGTCGTCGAT GCGCTTGTCG ACGACCTCCC TGTTTCCGAT
TCCGCCGATC TCAACGACAC GTCCGACAGT GCCGACGAGC CGGACGAAGA AGAGGAGGAG
GGCGAAGAGG CCGAGGAGGC CGCACCCGAG GAAGATTTCC GCAAGGTGCT GCAGGCCGAG
CTGGCCGCCG ACACTGTTCA GCACTATCTC AATCGCATCA GCATCAAGCC GCTCCTGACG
CCAGCAGAAG AACTGCATTT TTCGACGCTG GCCAAGGCCG GCGAATTCGC AGCGCGCCAG
GTCATGATCG AGCGCAACCT TCGCCTGGTC GTGAGTATCG CCAAGGGTTA TTTGAACCGC
GGTGTGCCGC TGCTCGATCT GATCGAGGAG GGCAACCTGG GTCTAATGCA CGCGATCGAA
AAATTCGATC CGGAACGCGG GTTCCGCTTC TCGACGTATG CAACGTGGTG GATCCGCCAA
AGCATCGAGC GCGCGATCAT GAATCAGGCG CGCACCGTCC GTTTGCCGGT GCATGTGATT
CGCGAGCTCA ATCAGGTGCT GCGCGCCAAG CGCCATCTGG AAAAGAGCGG CGTGGATGGC
CGAGACGCAA GCCTTGAAGA CATCGCCCAC CTGCTTGGCA AGACCACGGA GGAAGTGCAG
GACGTGCTCT CGCTCAACGA GCACACGACT TCGCTGGATA CGCCGTTCGA TCTTGATCCG
GGCACGAGCC TGCTCGACTT CCTATCGGAC GAGCATGGCG CATCGCCGGA TCAGGAAGTG
GCCCATCGCG AGCTGTCGCA GTTGATGAAG TCGTGGCTCG CACGCTTGTC CGACAAGCAT
CGCTATGTGG TCGAGCGCCG CTTTGGCCTC AACTACATCG AACCAGCGAC GCTGGAAGAA
CTGGCCGCCG AGATGGGTTT GACGCGCGAA CGCGTGCGGC AGATCCAGCA GGAAGCCCTG
GTCAAGCTAA AGCGCCATTT CGCCTCTCAG GGCGTACGCA AGGACGCGGT GCTGTAA
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| Protein sequence | MPRQKAATPV TPADDNIDAA VEGQRTPNGR AGRRARGAAQ PPAEEIEVVD ALVDDLPVSD
SADLNDTSDS ADEPDEEEEE GEEAEEAAPE EDFRKVLQAE LAADTVQHYL NRISIKPLLT
PAEELHFSTL AKAGEFAARQ VMIERNLRLV VSIAKGYLNR GVPLLDLIEE GNLGLMHAIE
KFDPERGFRF STYATWWIRQ SIERAIMNQA RTVRLPVHVI RELNQVLRAK RHLEKSGVDG
RDASLEDIAH LLGKTTEEVQ DVLSLNEHTT SLDTPFDLDP GTSLLDFLSD EHGASPDQEV
AHRELSQLMK SWLARLSDKH RYVVERRFGL NYIEPATLEE LAAEMGLTRE RVRQIQQEAL
VKLKRHFASQ GVRKDAVL
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