Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1142 |
Symbol | |
ID | 8018785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1207185 |
End bp | 1208009 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829923 |
Product | Peptidase M23 |
Protein accession | YP_002981106 |
Protein GI | 241662746 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.405042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCATTT CCCGGAGCTC CATGAACCGT CCAAGCCCCG CACGCGCAGG CCGGCTCGCC GTGGCGATGG TGTCGGCCGC ACTACTGGCG GCTTGCGCAT CCTCCGGCAA CCAGGCCCCT GTTCTCGACC GCACCTCGCG TGCAGGCAGC TCTGGCACCG TGTCGCAAGA GCCGCCGCCC CCCGGCTACT ATCGTGTCAA GCGTGGCGAT ACCTTGTACA GCATCGCGTT GCGTAACGGC CAAGCGCCGC GAGACCTGGT GGCCTGGAAC AACATCGCCA ACCCGAACCA GATCGAAGTC GATCAGTTGT TACGCGTCGT ACCGCCGAAC GCGGATGTCA GCAGCACTGG GGCCGTCGTT ACGCCTGTCC GCCCGGCCAA CACAACTACG CAGCCCGTTG ATTCCACACC CGCCACGCCG CCCGCAGCGT CGTCCAGCGC TCCTGCCGGG GCAACCGACA GCGCAATCTC GCTGGGCTGG CCGGCACGCG GCTCACTCAT CAACCGTTTC GATGACAAGA GCAACAAGGG CATCGACATT GGTGGCAAAC GTGGTGACGC GGTGGTCGCT GCCGACGACG GAAAAGTGAT CCACGTTGGA CCCTTGCGTG GGTACGGGAA TCTTGTCATC ATCAAACACA ACGACACGTT CCTGACCGCC TACGGCAACA ACGACAAGGT TCTGGTCACC GAGCAATCCA CGGTCAAGAA AGGGCAGAAG ATCGCCGAAA TGGGCAGTAC CGATGCGGAT CGCGTGAAGC TTCATTTTGA AGTGCGCCGC AACGGTAAGC CGGTCGATCC GATGCGCTAC TTGCCGCCTC AATAG
|
Protein sequence | MFISRSSMNR PSPARAGRLA VAMVSAALLA ACASSGNQAP VLDRTSRAGS SGTVSQEPPP PGYYRVKRGD TLYSIALRNG QAPRDLVAWN NIANPNQIEV DQLLRVVPPN ADVSSTGAVV TPVRPANTTT QPVDSTPATP PAASSSAPAG ATDSAISLGW PARGSLINRF DDKSNKGIDI GGKRGDAVVA ADDGKVIHVG PLRGYGNLVI IKHNDTFLTA YGNNDKVLVT EQSTVKKGQK IAEMGSTDAD RVKLHFEVRR NGKPVDPMRY LPPQ
|
| |