Gene Rpic12D_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1142 
Symbol 
ID8018785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1207185 
End bp1208009 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID644829923 
ProductPeptidase M23 
Protein accessionYP_002981106 
Protein GI241662746 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.405042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATTT CCCGGAGCTC CATGAACCGT CCAAGCCCCG CACGCGCAGG CCGGCTCGCC 
GTGGCGATGG TGTCGGCCGC ACTACTGGCG GCTTGCGCAT CCTCCGGCAA CCAGGCCCCT
GTTCTCGACC GCACCTCGCG TGCAGGCAGC TCTGGCACCG TGTCGCAAGA GCCGCCGCCC
CCCGGCTACT ATCGTGTCAA GCGTGGCGAT ACCTTGTACA GCATCGCGTT GCGTAACGGC
CAAGCGCCGC GAGACCTGGT GGCCTGGAAC AACATCGCCA ACCCGAACCA GATCGAAGTC
GATCAGTTGT TACGCGTCGT ACCGCCGAAC GCGGATGTCA GCAGCACTGG GGCCGTCGTT
ACGCCTGTCC GCCCGGCCAA CACAACTACG CAGCCCGTTG ATTCCACACC CGCCACGCCG
CCCGCAGCGT CGTCCAGCGC TCCTGCCGGG GCAACCGACA GCGCAATCTC GCTGGGCTGG
CCGGCACGCG GCTCACTCAT CAACCGTTTC GATGACAAGA GCAACAAGGG CATCGACATT
GGTGGCAAAC GTGGTGACGC GGTGGTCGCT GCCGACGACG GAAAAGTGAT CCACGTTGGA
CCCTTGCGTG GGTACGGGAA TCTTGTCATC ATCAAACACA ACGACACGTT CCTGACCGCC
TACGGCAACA ACGACAAGGT TCTGGTCACC GAGCAATCCA CGGTCAAGAA AGGGCAGAAG
ATCGCCGAAA TGGGCAGTAC CGATGCGGAT CGCGTGAAGC TTCATTTTGA AGTGCGCCGC
AACGGTAAGC CGGTCGATCC GATGCGCTAC TTGCCGCCTC AATAG
 
Protein sequence
MFISRSSMNR PSPARAGRLA VAMVSAALLA ACASSGNQAP VLDRTSRAGS SGTVSQEPPP 
PGYYRVKRGD TLYSIALRNG QAPRDLVAWN NIANPNQIEV DQLLRVVPPN ADVSSTGAVV
TPVRPANTTT QPVDSTPATP PAASSSAPAG ATDSAISLGW PARGSLINRF DDKSNKGIDI
GGKRGDAVVA ADDGKVIHVG PLRGYGNLVI IKHNDTFLTA YGNNDKVLVT EQSTVKKGQK
IAEMGSTDAD RVKLHFEVRR NGKPVDPMRY LPPQ