Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1127 |
Symbol | |
ID | 8018770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1192153 |
End bp | 1194354 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829908 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_002981091 |
Protein GI | 241662731 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.478197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTATC AAGTGCTCGC CCGCAAGTGG CGCCCCCGCG ATTTCACCAC GCTGGTCGGT CAGGAACACG TGGTGAAAGC GCTCACGCAT GCGCTCGAAC AGCAGCGCCT GCACCACGCA TACCTGTTCA CAGGCACGCG CGGTGTCGGC AAGACGACGC TGTCGCGCAT CCTGGCAAAA TCGCTCAATT GCGTCGGCGC GGATGGGCAG GGCGGTATCA CCGCACAGCC GTGCGGCGTG TGCCGCGCCT GTACCGAGAT CGATGCCGGG CGCTTTGTCG ATTACATCGA GATGGATGCC GCCTCCAACC GCGGCGTCGA CGAGATGGCG CAACTGCTGG ACCGCGCGAT CTACGCACCC ACAAGCGGCC GCTTCAAGGT CTACATGATC GACGAAGTGC ACATGCTGAC CAACCACGCC TTCAACGCGA TGCTGAAGAC GCTGGAAGAG CCGCCCGAGC ACGTCAAGTT CATTCTGGCG ACCACCGATC CACAGAAAAT TCCGGTGACG GTGCTGTCGC GCTGCCTGCA GTTCAACCTC AAGCAGATGC CGCCGGGGCA CATCGTGTCT CACCTCGATC GCATCCTTGG CGAAGAGGGC ATCGCTCACG AGCCGAACGC GCTGCGTCTG CTCGCGGCCG CGGCGCAGGG TTCGATGCGC GATGCGCTGT CGCTCACCGA CCAGGCCATC GCGTACAGCG CCGGCGACGT GAGCGAAGCC GCCGTGCGCG GCATGCTCGG CGCGATTGAT CAGAGCTACC TCGTGCGCCT GCTCGATGCA CTGGCCGATG AGAACGGCGC CGCGCTTGTC GAGATTGCCG ACGAAATGGC CGGGCGCAGT CTGAGCTTCT CGGGCGCGCT GCAGGATCTT GCATCCCTGC TGCAGAAGAT TGCGCTGGCG CAGGTCGTGC CCGCCGCTGT GCAGGACGAT TGGCCAGAGG CTGATGATGT ACGCCGCCTT GCCGAGCGGT TCGATGCGCA GTCCGTGCAA CTGTTCTACC AGTTTGCCAA CCTGGGCCGC AACGAATTGG CGCTCGCGCC GGATGAGTAC GCCGGCTTCA CGATGACGCT GCTGCGCATG CTTGCGTTCC AGCCCGGGCA GTCGGGTGGG GACACGGCGC CGCCTTCTGG CGGTGGCGGC GGCAAGCGCG CGATGCCGCT GGCTGCATCG CCAGCCGCAT CGACGCGTCC GGCGGTTACG GCGACGGCGC CTGTGGCGGC GCCGGTTGCT CGGGTTGCGC CGGTGGCCGT GCGTCCGCAG CCGGTGGTCG AGGCGCCGCG AGCGACTGAT CAGGCGACTC CGCCAGCACC CGCGCCCGTT GCGGCGGTTA CAGATTCGCA GGCTGCGGCC CCCGCACGTC GCTCGCCGGC AATGGAAGCG TTGGCCGCTG CGCGTCAGGC GTCAAGCCGT GGCCGCGGTG GCGCTCCTGC GCCCGCCGCT ACACCGGTTG CCGCTCCCGT CGCTCGTCCT GCTGCTCCCA TTGCGGGCCC ACGTCCGAAT ACGGCTGCGG CTACTGCTAC TGCTGCCGTG GTGTCCGCGC CGCAGCGCCG TGAACAACCG GCTGCAGTCG CCGTGCCCGC CGATGACGGC CCGCCACCCT GGGACGAAAT GCCGGGCGAG TTTGCTTCGC CGTCACTTGA AGAGATGGAC GCCGCCTTTG CCGGCTGGGA TGCCGCTTCG GGCGTGCGTC CTGGTGCGCC TGAACCGCCA ACAGGTTCAG CACCGATCGA GGCCCCCGCA GCCGCACCCG CGCCGGTCAA GACGATTGCC ACCGAGCCGG TAGCCGCTGC TACGCCGCCT GATCTGAGCG CCAGCAGTCT TGCCACGTTC GACGGCAATT GGCCGGCGCT GGCAGCGAGC CTGCCGATCC GCGGTCTGGC TCAGCAGCTG GCTTACCAGA GCGAGTTGGC GGCTGTGGAA GGTGCCACGA TGCGATTGCG TGTACCGTTG CCTCCGCTGA CTGATGCGAA CGTCGTCGAG CGTCTGGAAG CCGCACTGAC GGAACACTTC GGCACGCCCG TTCGTGTGGC GTGCGATATC GGAGCTGTAC GCGCCACCGC GGCGGCCGTC GATGCCGAGC AGCGCGCCGA GCGCCAGCGC AATGCCGAAG ATGCCATCGC CACCAACCCC TTTGTGCAGG CGCTGGTTCG GGACTTTGCC GCGCAGGTCG TGCCTGGGTC GATCCAACCG CACGCGCACT GA
|
Protein sequence | MSYQVLARKW RPRDFTTLVG QEHVVKALTH ALEQQRLHHA YLFTGTRGVG KTTLSRILAK SLNCVGADGQ GGITAQPCGV CRACTEIDAG RFVDYIEMDA ASNRGVDEMA QLLDRAIYAP TSGRFKVYMI DEVHMLTNHA FNAMLKTLEE PPEHVKFILA TTDPQKIPVT VLSRCLQFNL KQMPPGHIVS HLDRILGEEG IAHEPNALRL LAAAAQGSMR DALSLTDQAI AYSAGDVSEA AVRGMLGAID QSYLVRLLDA LADENGAALV EIADEMAGRS LSFSGALQDL ASLLQKIALA QVVPAAVQDD WPEADDVRRL AERFDAQSVQ LFYQFANLGR NELALAPDEY AGFTMTLLRM LAFQPGQSGG DTAPPSGGGG GKRAMPLAAS PAASTRPAVT ATAPVAAPVA RVAPVAVRPQ PVVEAPRATD QATPPAPAPV AAVTDSQAAA PARRSPAMEA LAAARQASSR GRGGAPAPAA TPVAAPVARP AAPIAGPRPN TAAATATAAV VSAPQRREQP AAVAVPADDG PPPWDEMPGE FASPSLEEMD AAFAGWDAAS GVRPGAPEPP TGSAPIEAPA AAPAPVKTIA TEPVAAATPP DLSASSLATF DGNWPALAAS LPIRGLAQQL AYQSELAAVE GATMRLRVPL PPLTDANVVE RLEAALTEHF GTPVRVACDI GAVRATAAAV DAEQRAERQR NAEDAIATNP FVQALVRDFA AQVVPGSIQP HAH
|
| |