Gene Rpic12D_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1127 
Symbol 
ID8018770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1192153 
End bp1194354 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content67% 
IMG OID644829908 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_002981091 
Protein GI241662731 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.478197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AAGTGCTCGC CCGCAAGTGG CGCCCCCGCG ATTTCACCAC GCTGGTCGGT 
CAGGAACACG TGGTGAAAGC GCTCACGCAT GCGCTCGAAC AGCAGCGCCT GCACCACGCA
TACCTGTTCA CAGGCACGCG CGGTGTCGGC AAGACGACGC TGTCGCGCAT CCTGGCAAAA
TCGCTCAATT GCGTCGGCGC GGATGGGCAG GGCGGTATCA CCGCACAGCC GTGCGGCGTG
TGCCGCGCCT GTACCGAGAT CGATGCCGGG CGCTTTGTCG ATTACATCGA GATGGATGCC
GCCTCCAACC GCGGCGTCGA CGAGATGGCG CAACTGCTGG ACCGCGCGAT CTACGCACCC
ACAAGCGGCC GCTTCAAGGT CTACATGATC GACGAAGTGC ACATGCTGAC CAACCACGCC
TTCAACGCGA TGCTGAAGAC GCTGGAAGAG CCGCCCGAGC ACGTCAAGTT CATTCTGGCG
ACCACCGATC CACAGAAAAT TCCGGTGACG GTGCTGTCGC GCTGCCTGCA GTTCAACCTC
AAGCAGATGC CGCCGGGGCA CATCGTGTCT CACCTCGATC GCATCCTTGG CGAAGAGGGC
ATCGCTCACG AGCCGAACGC GCTGCGTCTG CTCGCGGCCG CGGCGCAGGG TTCGATGCGC
GATGCGCTGT CGCTCACCGA CCAGGCCATC GCGTACAGCG CCGGCGACGT GAGCGAAGCC
GCCGTGCGCG GCATGCTCGG CGCGATTGAT CAGAGCTACC TCGTGCGCCT GCTCGATGCA
CTGGCCGATG AGAACGGCGC CGCGCTTGTC GAGATTGCCG ACGAAATGGC CGGGCGCAGT
CTGAGCTTCT CGGGCGCGCT GCAGGATCTT GCATCCCTGC TGCAGAAGAT TGCGCTGGCG
CAGGTCGTGC CCGCCGCTGT GCAGGACGAT TGGCCAGAGG CTGATGATGT ACGCCGCCTT
GCCGAGCGGT TCGATGCGCA GTCCGTGCAA CTGTTCTACC AGTTTGCCAA CCTGGGCCGC
AACGAATTGG CGCTCGCGCC GGATGAGTAC GCCGGCTTCA CGATGACGCT GCTGCGCATG
CTTGCGTTCC AGCCCGGGCA GTCGGGTGGG GACACGGCGC CGCCTTCTGG CGGTGGCGGC
GGCAAGCGCG CGATGCCGCT GGCTGCATCG CCAGCCGCAT CGACGCGTCC GGCGGTTACG
GCGACGGCGC CTGTGGCGGC GCCGGTTGCT CGGGTTGCGC CGGTGGCCGT GCGTCCGCAG
CCGGTGGTCG AGGCGCCGCG AGCGACTGAT CAGGCGACTC CGCCAGCACC CGCGCCCGTT
GCGGCGGTTA CAGATTCGCA GGCTGCGGCC CCCGCACGTC GCTCGCCGGC AATGGAAGCG
TTGGCCGCTG CGCGTCAGGC GTCAAGCCGT GGCCGCGGTG GCGCTCCTGC GCCCGCCGCT
ACACCGGTTG CCGCTCCCGT CGCTCGTCCT GCTGCTCCCA TTGCGGGCCC ACGTCCGAAT
ACGGCTGCGG CTACTGCTAC TGCTGCCGTG GTGTCCGCGC CGCAGCGCCG TGAACAACCG
GCTGCAGTCG CCGTGCCCGC CGATGACGGC CCGCCACCCT GGGACGAAAT GCCGGGCGAG
TTTGCTTCGC CGTCACTTGA AGAGATGGAC GCCGCCTTTG CCGGCTGGGA TGCCGCTTCG
GGCGTGCGTC CTGGTGCGCC TGAACCGCCA ACAGGTTCAG CACCGATCGA GGCCCCCGCA
GCCGCACCCG CGCCGGTCAA GACGATTGCC ACCGAGCCGG TAGCCGCTGC TACGCCGCCT
GATCTGAGCG CCAGCAGTCT TGCCACGTTC GACGGCAATT GGCCGGCGCT GGCAGCGAGC
CTGCCGATCC GCGGTCTGGC TCAGCAGCTG GCTTACCAGA GCGAGTTGGC GGCTGTGGAA
GGTGCCACGA TGCGATTGCG TGTACCGTTG CCTCCGCTGA CTGATGCGAA CGTCGTCGAG
CGTCTGGAAG CCGCACTGAC GGAACACTTC GGCACGCCCG TTCGTGTGGC GTGCGATATC
GGAGCTGTAC GCGCCACCGC GGCGGCCGTC GATGCCGAGC AGCGCGCCGA GCGCCAGCGC
AATGCCGAAG ATGCCATCGC CACCAACCCC TTTGTGCAGG CGCTGGTTCG GGACTTTGCC
GCGCAGGTCG TGCCTGGGTC GATCCAACCG CACGCGCACT GA
 
Protein sequence
MSYQVLARKW RPRDFTTLVG QEHVVKALTH ALEQQRLHHA YLFTGTRGVG KTTLSRILAK 
SLNCVGADGQ GGITAQPCGV CRACTEIDAG RFVDYIEMDA ASNRGVDEMA QLLDRAIYAP
TSGRFKVYMI DEVHMLTNHA FNAMLKTLEE PPEHVKFILA TTDPQKIPVT VLSRCLQFNL
KQMPPGHIVS HLDRILGEEG IAHEPNALRL LAAAAQGSMR DALSLTDQAI AYSAGDVSEA
AVRGMLGAID QSYLVRLLDA LADENGAALV EIADEMAGRS LSFSGALQDL ASLLQKIALA
QVVPAAVQDD WPEADDVRRL AERFDAQSVQ LFYQFANLGR NELALAPDEY AGFTMTLLRM
LAFQPGQSGG DTAPPSGGGG GKRAMPLAAS PAASTRPAVT ATAPVAAPVA RVAPVAVRPQ
PVVEAPRATD QATPPAPAPV AAVTDSQAAA PARRSPAMEA LAAARQASSR GRGGAPAPAA
TPVAAPVARP AAPIAGPRPN TAAATATAAV VSAPQRREQP AAVAVPADDG PPPWDEMPGE
FASPSLEEMD AAFAGWDAAS GVRPGAPEPP TGSAPIEAPA AAPAPVKTIA TEPVAAATPP
DLSASSLATF DGNWPALAAS LPIRGLAQQL AYQSELAAVE GATMRLRVPL PPLTDANVVE
RLEAALTEHF GTPVRVACDI GAVRATAAAV DAEQRAERQR NAEDAIATNP FVQALVRDFA
AQVVPGSIQP HAH