| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1108 |
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| Symbol | |
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| ID | 8018747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1164943 |
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| End bp | 1166829 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829886 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002981072 |
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| Protein GI | 241662712 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.762365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC GCGTTGCGGC ACACAAGCGA TTCATGGCGC TGTTCAGCCT GCTGGGGGCG
ATCTGCGCGA CTCCCGCGTG GGCGGCACAC GGCTACGCCG AATATGGCGA CCTCAAGTAT
CCGGCCGGTT TCTCCAACTT CGGCTATCTG AACCCGAAGG CGCCCATCGG CGGCATGCTG
CTGCTCGGCA ATCCGGACCG CCGCACGAGC TTCGACAAGT TCAATCCGTT CACGATCAAG
GGGACGTCGG CGCCGGGGCT GAATCAGTTG GTCTTCGAAA GCCTGCTCAT CACAAGCTGG
GATGAAACCG CCAGTGGCTA TGGCCTGCTT GCGGACGACG TGGCGGTCGC ACCTGACGAA
CTTTCGGTCA CGTTCCATAT CAATCCGCGC GCGCGCTTTT CCAATGGCGA TCGCGTGCGC
GCATCGGACG TCAAATACTC GTATGACATG CTGATGGGCA AGGGCGCGAG CCCGGCCTAT
CGCAGCATGA CCGCGGATGT GGCCAAGGTG ACCGTAGTGG ACGCCAGCAC CATCCGGTAT
GACTTCAAGC GCAAGAACAA GGAACTGCCG CTCATCGTCG GCGGGCTGCC GGTGTTCTCG
CCCAAGTGGG GCAAGGGCAG CGGCAAGCCC GACGACCCGG ATGGCGGCAA GGATGTCGCA
TTCGACAAAC TCACCTTCCA GGATCCCGTT GCCAGCGGGC CGTATGTGGT CGAGCGCTTT
GATCCGTCGC GCGGCATCAC CTTTCGGCGC AATCCCGACT ATTGGGGGCG CGACTTGAAT
GTTCGCCGTG GGTCATTCAA CTTTGAGCGA ATCCAATACA AGCTCTACAA GGACGAAACT
GCCCGCCTGG AGGCGTTCAA GGCTGGCGAG TACGACGCCA TGGTCGAATA CCGCGCCAAG
AACTGGGCGA AGAGTTACGT CGGCGTGAAA TTTCGCAGCG GCGAGCTGAT CAAGAGCGAA
TTCCCGCATC GCAACGGTGC CGGCATGCAG GGCTTTGTGA TGAATCTGCG GCGGCCTCTG
TTCCAGGACC TTCGCGTGCG CAAGGCCCTG GCGTTGGCGC TCGATTTCGA ATGGCTCAAT
CGACAGCTCT TCTACGGTGC ATATCGCCGG CTCGACAGCT ACTTCGCCAA TAGCCAGCTG
GCCGCGTCGG ATTCGCTCAC GGGCACGCCC AGCAAGGGTG AGCTGACGTT GCTGGAGCCG
CTGCGCAGCA AGCTCGACCC CGAAGTGTTT GGCGTGCTGT CCGCCCCGCC TTCGACGGAT
CCCCCCAGCT CGCTGCGGGA CAACCTGCGG CAGGCGCGTC GCCTGCTGGC GCAAGCCGGC
TGGACATACA CGGACGGCGC GCTGCGCAAC AGTAAGGGCG AGCCGTTCGT CTTCGAGATG
CTCGACGACG GGGGCGCCAT GAGCCGCGTC ATGGCGGCAT ATGCGCGCAA CCTCGAGAAG
CTGGGCATCC AGGTCAACCA GCGCATGACC GATTTCGCGC TTTACCAGAA GCGGTTGGAA
GAGTTCGATT TCGACATGAT CTCGCTGCGC TTTCCCGATT CGCAAAGCCC GGGCAACGAG
CTGAAGGACC GCTTCGGCTC GGCCGCAGCT GACGAGGCCG GCTCGGACAA CGTGATCGGC
CTGAAATCGC CAGCCGTGGA CGCGCTGATC GACGATGTAC TGCGTGCCGA CAATCGCGAC
GAGCTGATCA CCGCCTCGCG CGCGCTCGAC CGCGTACTGA TGCACGGCTG CTATGTGATT
CCACACTGGT ATTCGGCTTT GCACCGCGTG GCCTACAACA AGAACCTGAT GTACCCGGAT
CGTTTGCCGT ATTACTACTC GGCCGAGGCC TGGGTGCTGA CGGCCTGGTG GCGGATGCCG
GAATCCCCCC AATCGGCTGC CAAATGA
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| Protein sequence | MSVRVAAHKR FMALFSLLGA ICATPAWAAH GYAEYGDLKY PAGFSNFGYL NPKAPIGGML
LLGNPDRRTS FDKFNPFTIK GTSAPGLNQL VFESLLITSW DETASGYGLL ADDVAVAPDE
LSVTFHINPR ARFSNGDRVR ASDVKYSYDM LMGKGASPAY RSMTADVAKV TVVDASTIRY
DFKRKNKELP LIVGGLPVFS PKWGKGSGKP DDPDGGKDVA FDKLTFQDPV ASGPYVVERF
DPSRGITFRR NPDYWGRDLN VRRGSFNFER IQYKLYKDET ARLEAFKAGE YDAMVEYRAK
NWAKSYVGVK FRSGELIKSE FPHRNGAGMQ GFVMNLRRPL FQDLRVRKAL ALALDFEWLN
RQLFYGAYRR LDSYFANSQL AASDSLTGTP SKGELTLLEP LRSKLDPEVF GVLSAPPSTD
PPSSLRDNLR QARRLLAQAG WTYTDGALRN SKGEPFVFEM LDDGGAMSRV MAAYARNLEK
LGIQVNQRMT DFALYQKRLE EFDFDMISLR FPDSQSPGNE LKDRFGSAAA DEAGSDNVIG
LKSPAVDALI DDVLRADNRD ELITASRALD RVLMHGCYVI PHWYSALHRV AYNKNLMYPD
RLPYYYSAEA WVLTAWWRMP ESPQSAAK
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