Gene Rpic12D_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1107 
Symbol 
ID8018746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1163839 
End bp1164633 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID644829885 
Productenoyl-(acyl carrier protein) reductase 
Protein accessionYP_002981071 
Protein GI241662711 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.680719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCC TCGCTGGCAA GCGCATTCTG ATTACCGGCC TTCTGTCCAA CCGCTCGATT 
GCCTACGGCA TCGCCAATGC CTGCAAGCGC GAAGGCGCGG AACTGGCCTT CACCTACGTC
GGCGAACGCT TCAAGGACCG CATCACTGAA TTCGCCACCG AGTTCGACAG CAAGCTGGTG
TTCGACTGCG ATGTCAGCAG CGATGAGCAG ATCGCCAAGG TGTTCGAAGA CCTCTGCCAG
CACTGGGGCC ACTTCGACGG CCTGGTCCAC TCGATCGGCT TTGCACCGCG CGAAGCGATC
GCCGGCAACT TCATCGATGG CCTGTCGCGC GAGTCGTTCC GCATCGCGCA CGACATCTCG
GCGTACAGCT TCCCGGCGCT GGCAAAGGCC GCGCTGCCGA TGCTGTCCCC CAATGCTTCG
CTGCTCGCCC TGACGTACCT GGGTGCTGAG CGCATCGTCC CGAACTACAA CACGATGGGC
TTGGCCAAGG CGTCGTTGGA AGCCGGCGTG CGCTACCTGG CCGGCGCGCT GGGGCCGAAG
GGCATTCGTG CCAACGGTAT CTCGGCTGGC CCGATCAAGA CGCTCGCCGC CTCTGGTATC
AAGGATTTCG GCAAGCTGCT GAAGTACATG GAAGACGTCG CCCCGCTGCG CCGTAACGTC
ACGATCGAAG AAGTCGGCAA TGTGGCTGCG TTCCTGCTGT CGGATCTGGC AAGCGGTGTG
ACGGGCGAGA TCACCTACGT CGATTGCGGC TTCAACGTGA CCGCAGGCGT GCCGGAGAGC
GTCGGCCAAG GCTGA
 
Protein sequence
MGFLAGKRIL ITGLLSNRSI AYGIANACKR EGAELAFTYV GERFKDRITE FATEFDSKLV 
FDCDVSSDEQ IAKVFEDLCQ HWGHFDGLVH SIGFAPREAI AGNFIDGLSR ESFRIAHDIS
AYSFPALAKA ALPMLSPNAS LLALTYLGAE RIVPNYNTMG LAKASLEAGV RYLAGALGPK
GIRANGISAG PIKTLAASGI KDFGKLLKYM EDVAPLRRNV TIEEVGNVAA FLLSDLASGV
TGEITYVDCG FNVTAGVPES VGQG