Gene Rpic12D_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1101 
Symbol 
ID8018739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1156455 
End bp1157105 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID644829878 
ProductTetratricopeptide domain protein 
Protein accessionYP_002981065 
Protein GI241662705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.157985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC TGCTGCGTCA GACCGCTGCA ACCCTGGCTA GCCTGCTTGC GATGTCCGCG 
GCATCGGCCT TCGCCCAGAC CGCCGGCTTT GCCTTGCCGG CCGACTTGAT GCCCAGCACG
CAGCAGGCGC CGCAGGTCGC GCGCCAGAAA CGCATCGACG ATGCGTTGGC CAAGAAGCAA
TACACCGAGG CACTGGCCGA GCTGGACAAG GACGTCGCTT CTCAGCCGCG TAACGCGCAG
GCACGCTTTC AGCGCGGCGT GGCACTTGCC GGCCTGGGCC GCGCTGACGA TGCCATCGTC
GCCTTCAGCC AGATGACGCA GGACTTCCCG GAACTGCCCG AACCCTATAT CAACCTGGCC
GCGTTGTACG CCGAGCGCGG TGAACTGCTT CGCGCCCGCG ACAGCCTCCT CATGGCGAAC
CGGGTGGCGC CTGAAAATGC ATTGGCGCAA TCCAACCTTG GCGATGTCTA CGTTCGCCTG
GCCGCACAGT CGTACCAAAG TGCGCTCAAA CTGAACCCCA AGAATGCTGC CGCGCGCGCA
CGTCTGGATG CCCTGCCCGA TCTGCCGGGC GTGCACCCGG CTTCCAAACC CGCCTCGACC
ACCCTGCCCG CAGCCAGCGG CGTGAGCGCC AAGCCGGCAA AGCGTCAATA A
 
Protein sequence
MNRLLRQTAA TLASLLAMSA ASAFAQTAGF ALPADLMPST QQAPQVARQK RIDDALAKKQ 
YTEALAELDK DVASQPRNAQ ARFQRGVALA GLGRADDAIV AFSQMTQDFP ELPEPYINLA
ALYAERGELL RARDSLLMAN RVAPENALAQ SNLGDVYVRL AAQSYQSALK LNPKNAAARA
RLDALPDLPG VHPASKPAST TLPAASGVSA KPAKRQ