Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1101 |
Symbol | |
ID | 8018739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1156455 |
End bp | 1157105 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829878 |
Product | Tetratricopeptide domain protein |
Protein accession | YP_002981065 |
Protein GI | 241662705 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.157985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAC TGCTGCGTCA GACCGCTGCA ACCCTGGCTA GCCTGCTTGC GATGTCCGCG GCATCGGCCT TCGCCCAGAC CGCCGGCTTT GCCTTGCCGG CCGACTTGAT GCCCAGCACG CAGCAGGCGC CGCAGGTCGC GCGCCAGAAA CGCATCGACG ATGCGTTGGC CAAGAAGCAA TACACCGAGG CACTGGCCGA GCTGGACAAG GACGTCGCTT CTCAGCCGCG TAACGCGCAG GCACGCTTTC AGCGCGGCGT GGCACTTGCC GGCCTGGGCC GCGCTGACGA TGCCATCGTC GCCTTCAGCC AGATGACGCA GGACTTCCCG GAACTGCCCG AACCCTATAT CAACCTGGCC GCGTTGTACG CCGAGCGCGG TGAACTGCTT CGCGCCCGCG ACAGCCTCCT CATGGCGAAC CGGGTGGCGC CTGAAAATGC ATTGGCGCAA TCCAACCTTG GCGATGTCTA CGTTCGCCTG GCCGCACAGT CGTACCAAAG TGCGCTCAAA CTGAACCCCA AGAATGCTGC CGCGCGCGCA CGTCTGGATG CCCTGCCCGA TCTGCCGGGC GTGCACCCGG CTTCCAAACC CGCCTCGACC ACCCTGCCCG CAGCCAGCGG CGTGAGCGCC AAGCCGGCAA AGCGTCAATA A
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Protein sequence | MNRLLRQTAA TLASLLAMSA ASAFAQTAGF ALPADLMPST QQAPQVARQK RIDDALAKKQ YTEALAELDK DVASQPRNAQ ARFQRGVALA GLGRADDAIV AFSQMTQDFP ELPEPYINLA ALYAERGELL RARDSLLMAN RVAPENALAQ SNLGDVYVRL AAQSYQSALK LNPKNAAARA RLDALPDLPG VHPASKPAST TLPAASGVSA KPAKRQ
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