Gene Rpic12D_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1098 
Symbol 
ID8018736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1154469 
End bp1155287 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID644829875 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_002981062 
Protein GI241662702 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.472183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG CAGCGCACGC CTCACTGGCC TCCGCGCTGA AAGCACCGGT CCGGGTTTCC 
GGGCCGGTGT TTTTTATTTC GGATCTGCAC CTGACGGCCA GCATGCCGGC CACCGCCGCC
GCGTTCGAGC GCTTCCTGCG CACGCGCGCC CGCGAAGCCC GCACGCTCGT CATCCTGGGT
GACTTCTTCG AATACTGGGT CGGCGATGAA GAATTGGCTG ATCCGTTCCA TCGGCAGATC
GCCAACCTGA TCGCTGAGGT TGCAGCGGCC GGCACGCGCG TGCTGTTTAT GCACGGCAAT
CGCGATTTCC TGCTCGGCAA GCGTTTCTTG GATGCCGTGC ACGCCACGCT GCTGCCCGAT
CCCACCGTGC TCGAAGCGGA CGATGGCCAG CGCATCGTGC TTGCCCACGG CGACGCCCTC
TGCACGCGCG ACGCGGCCTA CATGCGCTTT CGCCACTGGA CGCGCAAGCG CTGGGTGCAG
CAATTGTTCC TGGCGATGCC GCTGCGCTGG CGGCTGAAGA TCGCGCAGAA GATGCGCGCA
GAAAGCGAAG CCGGCCGCGC CATGTCCGCC AATGTCGCCG GTGAGCCCCG TGCTGCCGCG
ATGATGGGCG ACGTCGCACC CGAAGCGGTG GATGCGCTGC TCAAGGCATC GGGCACGTCC
ACGCTGATTC ACGGCCACAC GCACCGCCCG CAACTGCATC ACGAGGCGAG CGGTGAACGC
TGGGTTCTTT CCGACTGGGA TTTCGACCAG GCACAGCCGC GCGGCAGTTT CCTCAAACTG
CGGGACGGCG CGCTGACGGT CGAGCAAGTG ACGGCATAA
 
Protein sequence
MIDAAHASLA SALKAPVRVS GPVFFISDLH LTASMPATAA AFERFLRTRA REARTLVILG 
DFFEYWVGDE ELADPFHRQI ANLIAEVAAA GTRVLFMHGN RDFLLGKRFL DAVHATLLPD
PTVLEADDGQ RIVLAHGDAL CTRDAAYMRF RHWTRKRWVQ QLFLAMPLRW RLKIAQKMRA
ESEAGRAMSA NVAGEPRAAA MMGDVAPEAV DALLKASGTS TLIHGHTHRP QLHHEASGER
WVLSDWDFDQ AQPRGSFLKL RDGALTVEQV TA