Gene Rpic12D_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1094 
Symbol 
ID8018732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1150701 
End bp1151405 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID644829871 
Productglutamine amidotransferase 
Protein accessionYP_002981058 
Protein GI241662698 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.82743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG CCCTCGCCCT GCGCCACGTT CCATTCGAGC ACCTTGGCAT CCTGCAGCCG 
CTGCTGGAAG CGCGCGGCTA CACGGTGCGC ACCGTTGACG TGGGCGTGCA GCCGGTGCCG
ACCGGCGACA TGGCGGATGC CGATCTATTG ATCGTGCTAG GGGGGCCCAT CGGCGCGTAT
GACGATGCGA CGTATCCGTT CGTACGCGAT GAAGCTGCCG CCATTGCGCA GCGGCTAGCC
GCTCGCAAGC CACTGCTGGG CATCTGCCTG GGCGCCCAGT TGATCGCACG GGCTCTGGGT
GCGGCAGTCA AGCCGATGGG CGTGAAGGAG ATCGGCTTTG CGCCCGTGAC GCTCACAGCC
GACGGCGCAG ACTCGCCGCT CGCGCCGCTG GCCGACGGCA CGCCGGTGCT GCACTGGCAT
GGCGACCGAT ACGACTTGCC GCCCGGCGCG CAACGGCTGG CGTTCACGGA AATCTGTGCC
GAGCAGGCTT TCGCTATCGG CAACCACGCG CTCGCGCTGC AATTTCATCT GGAGGCCAAT
CTGGAGGAGC TGGAAGCCTG GCTGATCGGG CATGCTGCAG AACTCGGCGC AGCGGGTATC
GACCCGCGCA CGTTGCGTGC ACAGGCGCCT GCGGTAGCGC AACGCCTGTC GCAACGCGCA
CGTGAGGTCT TCGCTGCCTG GCTGGACCGC GTGGAGGCCG CATGA
 
Protein sequence
MKTALALRHV PFEHLGILQP LLEARGYTVR TVDVGVQPVP TGDMADADLL IVLGGPIGAY 
DDATYPFVRD EAAAIAQRLA ARKPLLGICL GAQLIARALG AAVKPMGVKE IGFAPVTLTA
DGADSPLAPL ADGTPVLHWH GDRYDLPPGA QRLAFTEICA EQAFAIGNHA LALQFHLEAN
LEELEAWLIG HAAELGAAGI DPRTLRAQAP AVAQRLSQRA REVFAAWLDR VEAA