Gene Rpic12D_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1093 
Symbol 
ID8018731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1150000 
End bp1150704 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID644829870 
ProductMOSC domain containing protein 
Protein accessionYP_002981057 
Protein GI241662697 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.846076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGC CCGGCCCCAT CCGCATTGAT TCCCTCCTCG CCGGACGCGT GGTCGACTAC 
ACGCGCCCAG GCTCACGCAG CGCCATCGAC AAGCGGCCCG TGCGCGACGC AGTGGAGGTC
GGTATCAACG GCATCGTGGG CGATGAGCAA GGCGATCTGC GTGTGCACGG CGGCCCTGAC
AAGGCGATTC ATCACTACCC ATTCGACCAC TACGCGGCCT GGCAAGCGGA TATCGGCGCG
CAACCCGTGC TCGCACAGCC CAGCGCGTTT GGCGAGAACG TGAGCACCAC CGGCATCACC
GAAGCGGACA TCTGCGTGGG CGACCGTCTG CGTGCGGGCA GTGTGATGCT GGAAGTGTCG
CAACTGCGCC AGCCGTGCTG GAAGCTCAAC GACCGCTTCA ACACGCGCGA CATGGCGCGC
CGCGTGCAAC ACACGGGCCG CACGGGCTGG TATTACCGGG TTTTGCAAGG CGGCACGCTG
CGCGCGGACG ACACGCTCGA ATGGCTCGAG CGCCCGTGGC CGCAATGGCC GCTGTCGCGC
GTGCTCGACG TGCTTTACCG CAACATGCTC GACCGTGCAG CGCTGACTGA CATGCTGAGG
CTGCCGCTCA CGCCGTCGTG GCGCAAGCTG GTGGAAGGCC GCCTTGCGCG TGGCGAGGTG
GAAAGCTGGG CCAAACGCAT CGATGGCCCA GCGCTCGACG CTTGA
 
Protein sequence
MRLPGPIRID SLLAGRVVDY TRPGSRSAID KRPVRDAVEV GINGIVGDEQ GDLRVHGGPD 
KAIHHYPFDH YAAWQADIGA QPVLAQPSAF GENVSTTGIT EADICVGDRL RAGSVMLEVS
QLRQPCWKLN DRFNTRDMAR RVQHTGRTGW YYRVLQGGTL RADDTLEWLE RPWPQWPLSR
VLDVLYRNML DRAALTDMLR LPLTPSWRKL VEGRLARGEV ESWAKRIDGP ALDA