| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1089 |
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| Symbol | |
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| ID | 8018727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1142412 |
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| End bp | 1145060 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829866 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002981053 |
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| Protein GI | 241662693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC ACTCCGCTCC GGTTCTGGAG ATCGACCCGA AATACGGCCC GTTCGACAAG
CACACGCCGA TGATGCAACA GTACCTTCGC TTGAAGGCTG GGCATCCGGA CACGCTTGTC
TTCTACCGCA TGGGCGACTT TTACGAGCTC TTCTTTGAAG ACGCCGAAAA AGCCTCGCGG
CTGCTCGATA TCACGCTCAC CGCACGCGGC AGTTCCAACG GGCATCCGAT CCGCATGGCG
GGTATCCCGT TCCACGCTGC CGAGCAATAC CTTGCCAAGC TGGTCAAGCT GGGCGAATCC
GTTGCCATCT GCGAGCAAAT CGGGGACCCT GCGACGACCA AGGGGCCGGT CGAACGCAAG
GTCGTGCGCG TCGTCACGCC CGGCACCTTG ACGGACGCCG CGCTGCTTTC CGACAAGATC
AACAACCATC TGCTGGCCAT CGCGCAAGTG CCTGGCAAAC GCGGCGCGGC GCCGCTGATG
GGCCTGGCGT GGCTCAACCT CGTCGGCGGC GAATTGCGCG TGATGGAATG CAGCCCCGAC
CAGCTCGACC GCGAACTCGA ACGCATCCGC CCCGCCGAAG TGCTGGCCAA CGATGCGACG
CTCAACACCC TCCAGGTGGA TGTTGCCCGC ACGCGCCTGC CGGATTGGCA CTTCGACGTG
GAAGCCGGCA CCCGCCGCCT GCGCGAACAA CTCGGCGTGG CGAGCCTCGT CGCCTTTGGC
GCGGAAACGC TGACGGCCGC ATTGGCCGCT GCCGGTGCGC TGCTGAATTA CGCAGCGGCC
ACGCAAGGCC AATCCCTGCG CCACGTGATC GGCCTCACCG TCGAGCATGA AAGCGAATTC
ATCGGTCTGG ACACCGCCAC GCGCCGCAAC CTGGAGCTGA CCGAAACGCT TCGTGGGCAG
GAATCGCCGA CGCTGTTTTC GCTGCTCGAC ACCTGCGCGA CCAGCATGGG CAGCCGCCTG
CTGCGCCACT GGCTGCATCA TCCGCTGCGG GATCGCGCTG TGCCGCAAGC ACGGCAGCAA
GCGATTGAAG TGCTGCTCGG CAGCGATTGG CAAACGTTGC GTGCGACGCT GCGCACACTG
TCGGACGTGG AGCGCATTAC GGGGCGACTG GCGCTGCTGT CGGCGCGCCC GCGGGATCTG
TCGTCGTTGC GCGACACGCT CGCGCGCCTG CCGGAGATTC GCGAAGAACT GCCGCAGAGT
GACGCGGCTC CGCTGCTGAC AGAGCTGTAC GCCGCACTGA GCTTGCCTGA AGACGCCCAC
GCCCTGCTGC AGCGCGCCGT GATGGCCGAG CCGGCAGCCA TGGTGCGCGA CGGCGGCGTC
ATTGCCCGCG GCTACGATGC CGACCTCGAC GAGCTGCGCG ACATCTCGGA AAACTGTGGC
CAGTTCCTCG TCGATCTGGA AGCCCGAGAG CGCGAGCGCA CCGGCATTGC CAATCTGCGC
GTGGAATACA ACCGCGTGCA CGGTTTCTAC ATCGAAGTCA CCAACGGCCA GGCCGCCAAG
GTGCCCGACG ATTACCGCCG CCGCCAGACG CTGAAGAACG CCGAGCGTTA CATCACGCCC
GAGTTGAAAG CGTTCGAAGA CAAGGCGTTG TCGGCGCAGG ACCGTGCCCT GTCGCGCGAA
AAGCTCCTCT ACGAAGAGCT GCTCCAGAAA CTGTTGCCGC ACCTGGCCGA ATTCAAACGT
ATCGCCGCCG CGCTGGCACA GGCCGATGTG CTCGCGACGC TGGCCGAGCG TGCGCATGCG
CTGTCGTGGT CGCGCCCCAC GCTGACGGAC GCACCCGGTA TTGAGCTGAC GCGCGCACGC
CATCCGGTGG TCGAACAACA AGTCGAACAG TTCGTCGCCA ACGACTGCAT GCTGCAGGAG
GCGCGCAAGC TGCTGCTGAT CACGGGCCCA AACATGGGCG GTAAATCGAC CTTCATGCGG
CAAACCGCGC TCGTCGTGCT GCTCGCTTAC GTGGGCGCAT TTGTGCCGGC GGAGGTCGCA
GTCATCGGAC CGATCGACCG CATCTTCACG CGCATCGGCG CGGCGGACGA TCTGGCGGGC
GGGCGTTCGA CCTTCATGGT CGAAATGACC GAAGCCGCTG CCATCCTGCA CCGCGCGACG
CCCAACAGCC TCGTGCTGAT GGACGAAATC GGGCGAGGCA CGAGCACGTT CGACGGCCTG
GCGCTCGCCT GGGCAATTGC GCGTCACTTG CTGTCGCACA ACCGCAGCCA CACGCTGTTC
GCAACGCACT ATTTCGAACT GACGCAACTG CCGCAGGAGT TCGCTCAGGC AGCGAACGTG
CACCTCTCCG CCGTCGAGCA TGGTGATGGC ATTGTTTTCC TGCATGCCGT GCAGGAGGGT
CCGGCCAGCC AGAGTTACGG CCTGCAGGTC GCGCAGCTGG CGGGCGTGCC GCAGCCGGTC
ATTCGCGCCG CGCGCAAGCG GCTCGCGTGG CTGGAGCAGC ATTCCGCCGA CACCGGCGCC
ACGCCTCAGT TGGACCTCTT CGCCCTCGCC ACCGATACGC CCATCGACGA CGAAGGCGAC
GCCGACGCCG AAACACCCGA CAGCGCGCTT GCGGATGCGC TTGCCGGGAT CGATCCCGAC
GATATGACGC CGCGGGAAGC GCTTGATGCG TTGTACCGCC TCAAGGCATT GGCGAGCCCG
GCCGCCTGA
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| Protein sequence | MAEHSAPVLE IDPKYGPFDK HTPMMQQYLR LKAGHPDTLV FYRMGDFYEL FFEDAEKASR
LLDITLTARG SSNGHPIRMA GIPFHAAEQY LAKLVKLGES VAICEQIGDP ATTKGPVERK
VVRVVTPGTL TDAALLSDKI NNHLLAIAQV PGKRGAAPLM GLAWLNLVGG ELRVMECSPD
QLDRELERIR PAEVLANDAT LNTLQVDVAR TRLPDWHFDV EAGTRRLREQ LGVASLVAFG
AETLTAALAA AGALLNYAAA TQGQSLRHVI GLTVEHESEF IGLDTATRRN LELTETLRGQ
ESPTLFSLLD TCATSMGSRL LRHWLHHPLR DRAVPQARQQ AIEVLLGSDW QTLRATLRTL
SDVERITGRL ALLSARPRDL SSLRDTLARL PEIREELPQS DAAPLLTELY AALSLPEDAH
ALLQRAVMAE PAAMVRDGGV IARGYDADLD ELRDISENCG QFLVDLEARE RERTGIANLR
VEYNRVHGFY IEVTNGQAAK VPDDYRRRQT LKNAERYITP ELKAFEDKAL SAQDRALSRE
KLLYEELLQK LLPHLAEFKR IAAALAQADV LATLAERAHA LSWSRPTLTD APGIELTRAR
HPVVEQQVEQ FVANDCMLQE ARKLLLITGP NMGGKSTFMR QTALVVLLAY VGAFVPAEVA
VIGPIDRIFT RIGAADDLAG GRSTFMVEMT EAAAILHRAT PNSLVLMDEI GRGTSTFDGL
ALAWAIARHL LSHNRSHTLF ATHYFELTQL PQEFAQAANV HLSAVEHGDG IVFLHAVQEG
PASQSYGLQV AQLAGVPQPV IRAARKRLAW LEQHSADTGA TPQLDLFALA TDTPIDDEGD
ADAETPDSAL ADALAGIDPD DMTPREALDA LYRLKALASP AA
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