Gene Rpic12D_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1087 
Symbol 
ID8018725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1140755 
End bp1141282 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID644829864 
Productfkbp-type peptidyl-prolyl cis-trans isomerase (rotamase) protein 
Protein accessionYP_002981051 
Protein GI241662691 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATCG CGAAGAATAC GGTAGTGTCG GTGGCTTACA AACTGTCCGA CGCGCAGGGC 
AACGTCATCG AGGAATCCGA TGAGCCGATG GTGTATTTGC ACGGCGGCTA TGATGGCACG
TTCCCTAAGA TCGAGGAAGC GCTGGACGGC CAGGAACAAG GCTTCGAGAC CAAGCTGCAG
CTCGAACCGG ACGACGCTTT CGGTGACTAC GATCAAGAGC TGATCAAGAT CGAGCCGCGT
GACCGCTTTC CGGAACCGCT CGAAGTTGGC ATGCAGTTCG AGGGCGTGCC CGAAGATGGC
GATGAGGAAG ATGCCATCGT CTATACAGTC ACCGACGTGG CGGAAGACAA GGTTGTGCTG
GACGGCAATC ACCCGCTCGC CGGCATGGCG CTGCGCTTCG AACTGAAGGT GACCGAAGTG
CGGGAAGCCA CGGCTGAAGA GATCGAGCAC GGCCACGTGC ACGGTGAACA CGGCCTTGAA
GTAGTGGACG AGGACGAAGA CGACGACAAG CCGCACACGC TGCACTGA
 
Protein sequence
MKIAKNTVVS VAYKLSDAQG NVIEESDEPM VYLHGGYDGT FPKIEEALDG QEQGFETKLQ 
LEPDDAFGDY DQELIKIEPR DRFPEPLEVG MQFEGVPEDG DEEDAIVYTV TDVAEDKVVL
DGNHPLAGMA LRFELKVTEV REATAEEIEH GHVHGEHGLE VVDEDEDDDK PHTLH