| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1086 |
|---|
| Symbol | |
|---|
| ID | 8018724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1139514 |
|---|
| End bp | 1140743 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644829863 |
|---|
| Product | Cupin 4 family protein |
|---|
| Protein accession | YP_002981050 |
|---|
| Protein GI | 241662690 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG TCTCATTATA CGCTGCCGAT GGCGGCGTCC AACCTGCTCT CCCAGCGGGG
CATCCGGCGC AACTCCTCGG CGGGCTGTCA CCGCGCGAAT TCATGCGCAC GCACTGGCAG
AAACAGCCGC TGCTGATCCG GCAGGCACTC TCCCCCGAAG AGATGCGTGC GCTGCACTTT
CCGCTCTCGC CCGAACGTGT ACTTGCCCTG GCTGCGCGCC CCGATGTCGA GTCCCGCTTG
ATCGCGCAAT CGCGCGGGCG CTGGTCGTTC AATCACGGCC CCTTCGACGA ACGCCCGCTG
CCCTCGCGCA AGACACGCAA CTGGTCGGTG CTTGTGCAGG GCGCGAATCT CGTCGAGCCG
GCAGTCGAGG CGCTCATGCA GCGTTTCCGA TTCATTCCGG ATGCGAGGCT CGACGACGTG
ATGATCAGCT TCGCGACCGA CGGCGGCGGC GTCGGCCCGC ACTTCGATTC GTACGATGTG
TTCCTGCTGC AGGCCCACGG CAGGCGCCGC TGGCGCATCT CAGCCCAGGA CGATCTCACG
CTCGTCCCCG ATCTGCCGCT CAAGATCCTC GCCAACTTCC AGCCCGAAGA GGAATTCGTA
CTAGAGCCCG GCGACATGCT GTATCTGCCG CCGCACTACG CACATGACGG CGTGGCCGAG
GGCGACTGCA TGACGTATTC GATCGGCTTC CGCTCACCGT CGTACCGCGA ACTGGCCGGC
CACTTCCTGG GCTTCCTGTC GCAAACGCTG GAAGACGACC CCAACTTCGA CGGCCGCTAC
GCCGATCCCG AACAGAAGCC CACCACCCAC CCCGGCGAAC TGCCGGCCGC CATGGTCAAG
GCCCTTGTCC AGAAGCTCAA CGCGTTGCGC TGGACGCCTG AACTCGTCGG TGAATTCCTC
GGCGCGTACC TTTCCGAACC CAAGGATCAC GTCGACTTCG TCACGCAGCC CCGCTTGCCG
CTCGCACGCT TCACGGCCCG GGCGCGCAAG GAAGGCATCG TCCTCGATGC GCGAACGCAG
GCGTTGTATG ACGCGCAACG CTTCTGGATC AACGGCGATA CGTTTGAACC ATCGGGAACG
CTGCTTGCGT GGCTCTCCGC GTTGGCGGAC GCACGTCGTG CGAGCGCTGC ATCCGTGGAT
GCGGCGGCCG GCTTGCCAGA TCTGATGGAT ACGCTGCACG CTTGGTACGA AGAAGGCTGG
CTCAGGCTGG CTGGACCCGC GCAACGATGA
|
|---|
| Protein sequence | MNEVSLYAAD GGVQPALPAG HPAQLLGGLS PREFMRTHWQ KQPLLIRQAL SPEEMRALHF
PLSPERVLAL AARPDVESRL IAQSRGRWSF NHGPFDERPL PSRKTRNWSV LVQGANLVEP
AVEALMQRFR FIPDARLDDV MISFATDGGG VGPHFDSYDV FLLQAHGRRR WRISAQDDLT
LVPDLPLKIL ANFQPEEEFV LEPGDMLYLP PHYAHDGVAE GDCMTYSIGF RSPSYRELAG
HFLGFLSQTL EDDPNFDGRY ADPEQKPTTH PGELPAAMVK ALVQKLNALR WTPELVGEFL
GAYLSEPKDH VDFVTQPRLP LARFTARARK EGIVLDARTQ ALYDAQRFWI NGDTFEPSGT
LLAWLSALAD ARRASAASVD AAAGLPDLMD TLHAWYEEGW LRLAGPAQR
|
|---|
| |