Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1080 |
Symbol | |
ID | 8018718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1133327 |
End bp | 1133992 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644829857 |
Product | peptidase M50 |
Protein accession | YP_002981044 |
Protein GI | 241662684 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0146579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCCA CACTGATCCA GAACATCGCG GTTTACGCGA TTCCCGTCCT GTTTGCCATC ACGCTGCATG AGGCGGCGCA CGGTTACGTC GCCAAGCATT TCGGCGACGA TACAGCCTAT GTCATGGGCC GCATCAGCAT CAATCCCCTG CGCCACATCG ATCCCATCGG CACGATTGCG ATGCCGTTGC TGCTGTATTT TGCAACGCAT GGTGCCTTCG TGTTTGGCTA TGCCAAGCCG GTGCCGGTGC GCTTCGACCG TCTGCGGGAC CCGCGCTGGC ATGGCATGTG GGTGGCGCTG GCGGGGCCCG TTACCAACTT TGGCCAGGCG ATCTTCTGGG GCGTGCTGGC GGTGGTGTTC GCGGTGGGCG GCGTGAACGA GCCGTTCCTG ATCGGCATGG CGCGCGCGGG CATTCTGGTC AATATGGTGA TGGCGGCGTT CAACATGTTT CCGCTGCCGC CGCTCGATGG CGGGCGCGTG CTGGCAGCAC TCCTGCCACC CCGGATGGCG CTCGGTCTAT CGCGCATCGA ACCGTTCGGC TTCTTTATCG TGATGGCGTT GATTATTTCC AACGTCATCA CCAACGTCTG GATGCGCCCG ATCATGGCGC TGCTGTTTCA ACTGCTGCAG TGGATTCTGA GTCCGCTGCA GATGCTGTTT TCCTGA
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Protein sequence | MDPTLIQNIA VYAIPVLFAI TLHEAAHGYV AKHFGDDTAY VMGRISINPL RHIDPIGTIA MPLLLYFATH GAFVFGYAKP VPVRFDRLRD PRWHGMWVAL AGPVTNFGQA IFWGVLAVVF AVGGVNEPFL IGMARAGILV NMVMAAFNMF PLPPLDGGRV LAALLPPRMA LGLSRIEPFG FFIVMALIIS NVITNVWMRP IMALLFQLLQ WILSPLQMLF S
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