| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1079 |
|---|
| Symbol | |
|---|
| ID | 8018717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1132637 |
|---|
| End bp | 1133260 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644829856 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_002981043 |
|---|
| Protein GI | 241662683 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0136774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGT TTTTCCAGAT CCATCCGACC ACGCCGCAAG GGCGCTTGAT CCGCCAGGCC
GTGGAGATCA TCCGCAGCGG TGGCCTGGTC GCACTGCCCA CCGATTCCTG CTACGCACTC
GCCTGCCATC TGGACGACAA ATCCGCCGTC GAGCGCCTGC GCCGCGTGCG CGGCATTGAC
GAAAAGCACC ACCTCACGCT GATGTGCCGA GACCTTTCCG AACTCGCCAC GTTTGCGCGC
GTCGACAACA AGCAATACCG TGTGCTGAAG GCGGCGACGC CAGGGCCCTT CGTTTTCCTG
CTGGAGGCGA CCAAGGAAGT GCCGCGCCGG CTCTCGCATC CGTCGCGCAA AACCATCGGC
CTGCGCGTAC CGGAACACGC GATTCCCCTG GCGCTGATGG CCGAGCTGGG TGAGCCGCTG
CTCTCCGCGA CGCTGCAACT GCCCGGCGAT GACGAACCGC TCAACGAGGC CGAGACCATT
CGGGATCGGC TTGAAAAGCA ACTCGAACTT GTCATTGACG GCGGCCCGGC CCCGGCAGAA
CCCACCACCG TCATCGACCT GACAGGCGGC GAGCCCGAGC TTGTGCGCCA AGGCCGGGGT
GATCCGGCTC GCGTGGGCCT GTAG
|
|---|
| Protein sequence | MSQFFQIHPT TPQGRLIRQA VEIIRSGGLV ALPTDSCYAL ACHLDDKSAV ERLRRVRGID
EKHHLTLMCR DLSELATFAR VDNKQYRVLK AATPGPFVFL LEATKEVPRR LSHPSRKTIG
LRVPEHAIPL ALMAELGEPL LSATLQLPGD DEPLNEAETI RDRLEKQLEL VIDGGPAPAE
PTTVIDLTGG EPELVRQGRG DPARVGL
|
|---|
| |