| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1076 |
|---|
| Symbol | |
|---|
| ID | 8018714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1129980 |
|---|
| End bp | 1130525 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644829853 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002981040 |
|---|
| Protein GI | 241662680 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.376591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAC CGTCGCTCTA CGAAACTGTG CTTGGCGCGC GATATGCGGA ACTGGCGCCG
GCCGTGCAGA CCTTCCACCG CCTGACCGGC GCGGTGACGC TGCACGGCGA AGTCGAAACG
GAACCGCCAG CCACGCACCT CGCGCGCGTG CTCGCATGGT GTATTCGCAC GCCGCGGACA
CCGACGCGTG GCCCGATCCG AATCACGCTC GACACTGCCG GCACGGAAGA AATCTGGACG
CGCCAATTTC CCCGCCACAC GATGCGCTCG ACCTTGTCGC TGCACCGGGG GTACCTCACA
GAGCGGCTCG GCGCGGTGCG CCTGTTCTTT GGGCTGGAGA CACATTACGG CGTGTTGCGG
ATGCGCCTGC AAGGTTTGCG CTTTCTCGGC ATCCCTTGCC CTGCCTGGCT GCGGCCCGCC
GTGTTGGCCG AGGAATCCGG CGACGGTGAC CGCTTCCACT TCAACGTGCG CGCCAGCGTG
CCGTTGCTTG GCGTGGTTGC GGCGTATCGA GGTTATCTCG ACCTGAGGAC GATGGAGCGC
GAATGA
|
|---|
| Protein sequence | MRAPSLYETV LGARYAELAP AVQTFHRLTG AVTLHGEVET EPPATHLARV LAWCIRTPRT
PTRGPIRITL DTAGTEEIWT RQFPRHTMRS TLSLHRGYLT ERLGAVRLFF GLETHYGVLR
MRLQGLRFLG IPCPAWLRPA VLAEESGDGD RFHFNVRASV PLLGVVAAYR GYLDLRTMER
E
|
|---|
| |