| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1072 |
|---|
| Symbol | |
|---|
| ID | 8018710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1127103 |
|---|
| End bp | 1127630 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644829849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002981036 |
|---|
| Protein GI | 241662676 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0856829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCT ACCAACTCGG CGACGTTGCC CCGAACATTG ACGCAAACGC CTATGTGGCC
CCGGAAGCGA CCGTTATCGG CCGCGTGGAG TTGAAAGCAC GTGCAAGCGT GTGGCCCGGC
GCCGTCATCC GCGGCGACAA CGAGCCGATC ACCGTGGGCG AGGCCAGCAA CGTGCAGGAA
GGCTCGGTAC TGCACACCGA CCCGGGCTGC CCGCTGAACA TCGGCGACCG CGTAACGATC
GGCCACCAGG CCATGCTGCA CGGCTGCACC ATCGGCGAGG GCTCGCTGAT CGGCATACAG
GCGGTGGTGC TCAATCGCGC GGTGATCGGC AAGAACTGCC TGGTGGGTGC TGGAGCGATT
GTCACGGAGG GCAAGGTCTT CGAAGACGGC ACACTCATTC TGGGTGCCCC CGCGAAGGCT
GTTCGCAAAC TGACGGAAGA CGACATTGCC AAGATGCACC TGAACACCGA AACGTATGCG
GTGCGCCAGG CGATGTACAA GCAGCAACTG AAACGGATCG ATGGATGA
|
|---|
| Protein sequence | MALYQLGDVA PNIDANAYVA PEATVIGRVE LKARASVWPG AVIRGDNEPI TVGEASNVQE
GSVLHTDPGC PLNIGDRVTI GHQAMLHGCT IGEGSLIGIQ AVVLNRAVIG KNCLVGAGAI
VTEGKVFEDG TLILGAPAKA VRKLTEDDIA KMHLNTETYA VRQAMYKQQL KRIDG
|
|---|
| |