Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1063 |
Symbol | |
ID | 8018701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1119002 |
End bp | 1119904 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829840 |
Product | hypothetical protein |
Protein accession | YP_002981027 |
Protein GI | 241662667 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3484] Predicted proteasome-type protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.503202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTATT GCGTCGCCAT GCGCCTGGAC GCAGGCCTTG TATTCCTGTC CGACTCCCGC ACGAACGCGG GCGTGGATGC CATTTCCACG TTCCGCAAGA TGACCGTCTT CGAACGCGAA GGCGATCGCG TCATGGTGTT GCTGACGGCT GGGAATCTGG CAATCAGCCA GGCCGTGCGC CAGGTGTTGA CCGAAGCACG CGGCAAGCCG CGCTCGCTGT GGACTGCGCG GGACATGTTC GAAGCTGCCA CGATCGTCGG CGAGGCCGTG CGCGACGTGT ATGACCGCGA CGCCGCGGCG CTGGCCAAGG CCAAGATCGA CTTCAACGTC AGCATTATCT TCGGTGGGCA GATTGGCGAA GAGCGGTCGC GCCTGTTTAA CGTCTATGCA GCGGGCAACT TCATTGAAGC CACGCCCGAG AACTGCTACT TCCAGATCGG CGAGGCCAAG TACGGTAAGC CCATCATCGA CCGCGTGGTC AGCCCGGGGC TACCGCTGGA CGAAGCCGCG AAGTGCGCGC TGATCTCGAT GGATTCGACG CTGAAGTCGA ATATTTCCGT GGGTTTGCCG TTGGATTTGC TGGTCTACGA GGCGGACTCC CTGCAGGTGA CGCGCTTTGT CGCCATCGAC GAAGACAACC CCTATTTCGC GATGATCCGC GGCACGTGGG GCAAGCGTCT GCGCCAGGTG TTTGCTGAAA TCGAGGATCC GGATTGGGAA ACCGGCACTT CGCCGGCGCA CCCGTTGCGC CGCGAGGGGC ACCCCTCGGC AGAGGTGGGA CCTGTCCGCA TTGCCCCGCC CGCCGCCGAA GCCCCGGCCA CACCGGAGCG CGCCCCCGGC CCGGCGTTGG AGCAGGTGTC CACGATCCAG CGCGTGGCCG GCGGGTCGCA GAAGTCGCGC TGA
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Protein sequence | MTYCVAMRLD AGLVFLSDSR TNAGVDAIST FRKMTVFERE GDRVMVLLTA GNLAISQAVR QVLTEARGKP RSLWTARDMF EAATIVGEAV RDVYDRDAAA LAKAKIDFNV SIIFGGQIGE ERSRLFNVYA AGNFIEATPE NCYFQIGEAK YGKPIIDRVV SPGLPLDEAA KCALISMDST LKSNISVGLP LDLLVYEADS LQVTRFVAID EDNPYFAMIR GTWGKRLRQV FAEIEDPDWE TGTSPAHPLR REGHPSAEVG PVRIAPPAAE APATPERAPG PALEQVSTIQ RVAGGSQKSR
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