Gene Rpic12D_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1063 
Symbol 
ID8018701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1119002 
End bp1119904 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content64% 
IMG OID644829840 
Producthypothetical protein 
Protein accessionYP_002981027 
Protein GI241662667 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3484] Predicted proteasome-type protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.503202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATT GCGTCGCCAT GCGCCTGGAC GCAGGCCTTG TATTCCTGTC CGACTCCCGC 
ACGAACGCGG GCGTGGATGC CATTTCCACG TTCCGCAAGA TGACCGTCTT CGAACGCGAA
GGCGATCGCG TCATGGTGTT GCTGACGGCT GGGAATCTGG CAATCAGCCA GGCCGTGCGC
CAGGTGTTGA CCGAAGCACG CGGCAAGCCG CGCTCGCTGT GGACTGCGCG GGACATGTTC
GAAGCTGCCA CGATCGTCGG CGAGGCCGTG CGCGACGTGT ATGACCGCGA CGCCGCGGCG
CTGGCCAAGG CCAAGATCGA CTTCAACGTC AGCATTATCT TCGGTGGGCA GATTGGCGAA
GAGCGGTCGC GCCTGTTTAA CGTCTATGCA GCGGGCAACT TCATTGAAGC CACGCCCGAG
AACTGCTACT TCCAGATCGG CGAGGCCAAG TACGGTAAGC CCATCATCGA CCGCGTGGTC
AGCCCGGGGC TACCGCTGGA CGAAGCCGCG AAGTGCGCGC TGATCTCGAT GGATTCGACG
CTGAAGTCGA ATATTTCCGT GGGTTTGCCG TTGGATTTGC TGGTCTACGA GGCGGACTCC
CTGCAGGTGA CGCGCTTTGT CGCCATCGAC GAAGACAACC CCTATTTCGC GATGATCCGC
GGCACGTGGG GCAAGCGTCT GCGCCAGGTG TTTGCTGAAA TCGAGGATCC GGATTGGGAA
ACCGGCACTT CGCCGGCGCA CCCGTTGCGC CGCGAGGGGC ACCCCTCGGC AGAGGTGGGA
CCTGTCCGCA TTGCCCCGCC CGCCGCCGAA GCCCCGGCCA CACCGGAGCG CGCCCCCGGC
CCGGCGTTGG AGCAGGTGTC CACGATCCAG CGCGTGGCCG GCGGGTCGCA GAAGTCGCGC
TGA
 
Protein sequence
MTYCVAMRLD AGLVFLSDSR TNAGVDAIST FRKMTVFERE GDRVMVLLTA GNLAISQAVR 
QVLTEARGKP RSLWTARDMF EAATIVGEAV RDVYDRDAAA LAKAKIDFNV SIIFGGQIGE
ERSRLFNVYA AGNFIEATPE NCYFQIGEAK YGKPIIDRVV SPGLPLDEAA KCALISMDST
LKSNISVGLP LDLLVYEADS LQVTRFVAID EDNPYFAMIR GTWGKRLRQV FAEIEDPDWE
TGTSPAHPLR REGHPSAEVG PVRIAPPAAE APATPERAPG PALEQVSTIQ RVAGGSQKSR