Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1060 |
Symbol | |
ID | 8018698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1115502 |
End bp | 1116986 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829837 |
Product | protein of unknown function DUF404 |
Protein accession | YP_002981024 |
Protein GI | 241662664 |
COG category | [S] Function unknown |
COG ID | [COG2308] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.733731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCC GGTTCTACGA TGAAATGCTC AAATGGCATG ACGGGGACCG CAGCCCCCAT GCCGCCGAAC CGGCCCCGGC AGCGCTCGTC CAGCAGGGCG AGGTTCGCAG CCACTACGGA CGTTTCGCCG AATGGCTGGG CGCGCAATCC GCCACGACCC TGCAGAACAA GCGCGCCGAG GCAGACCTGA TTTTCCGCCG CGTCGGCATC ACGTTTGCCG TGTACGGCGA CAAGGACGAA TCGAACAGCG GCACCGAACG CACGATCCCG TTCGACATCA TTCCGCGCAT CTTTCCCGCA AGCGAATGGG CCACGCTCGA GCGCGGCCTG CGGCAGCGCG TTGATGCGCT GAACCGCTTC CTGCACGACA TTTACCACGA GCAGAACATC CTGCGCGCGG GCGTCATCCC GCCCGACCAG ATCTACAACA ACGCGCAATA CCGCCCGGAC ATGCTGGGCG TCAACGTGCC GCGCGACATC TACGCGCACG TGGCCGGCAT CGACATCGTG CGCGCCGGCG AGGGCGAGTT CTACGTGCTG GAAGACAACC TGCGCGTGCC TTCCGGTGTG TCGTACATGC TGGAAAACCG CAAGATGATG ATGCGGTTGT TTCCGGAGTT GTTCGCACGC AATCGTGTGG CGCCGGTCGC GCATTACCCC GACATGCTGC TCGACATGCT GCGCAGCGTC TCGCCCCAGA ACATTGCCGA CCCGACCGTG GTGGTGCTCA CACCAGGCAT GTACAACTCC GCGTATTTCG AACATGCGTT CCTCGCTCAG CAGATGGGCG TTGAACTCGT GGAGGGGCAC GACCTCTTCG TGCAGGACGA TCATCTGTAC ATGCGCACGA CGCAGGGCCC GCAGCGCATC GATGTGATTT ACCGCCGTGT GGACGATGAC TTCCTCGATC CGCTCGTCTT CCGGCCGGAT TCTTCGCTCG GCGCGGCAGG GCTGCTGTCG GTCTATCGCG CGGGCAACGT GACGATCTGC AATGCCATCG GCACCGGCGT GGCAGACGAC AAGTCGATCT ACCCGTATGT GCCGGACATG ATCCGCTTCT ACCTGGGCGA GGAGCCGATC CTGAATAACG TGCCGACGTA CATGTGCCGC CGGCCGGATG ACCTGCAATA CGTCCTGGAC CACATGGGCG AACTGGTGGT CAAGGAGACG CACGGGGCAG GCGGCTACGG CATGCTGGTC GGTCCGGCTG CCACGCAGGA AGAGATTGCC GCTTTCCGTG AGGTGGTGAA GGCGCGCCCC GATCAGTACA TCGCCCAGCC CACCTTGGCG CTGTCGACTT GCCCCACGTA TGTGGAAGCC GGTATCGCGC CGCGCCATAT CGATCTTCGG CCGTTCGTGC TCTCCGGCAA GGACGTGCGC ATGGTGCCGG GCGGCCTCAC GCGTGTGGCG TTGCGGGCCG GTTCGCTGGT GGTCAACTCA TCGCAGGGCG GGGGAACGAA AGACACGTGG GTGCTGGAGC GCTGA
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Protein sequence | MAVRFYDEML KWHDGDRSPH AAEPAPAALV QQGEVRSHYG RFAEWLGAQS ATTLQNKRAE ADLIFRRVGI TFAVYGDKDE SNSGTERTIP FDIIPRIFPA SEWATLERGL RQRVDALNRF LHDIYHEQNI LRAGVIPPDQ IYNNAQYRPD MLGVNVPRDI YAHVAGIDIV RAGEGEFYVL EDNLRVPSGV SYMLENRKMM MRLFPELFAR NRVAPVAHYP DMLLDMLRSV SPQNIADPTV VVLTPGMYNS AYFEHAFLAQ QMGVELVEGH DLFVQDDHLY MRTTQGPQRI DVIYRRVDDD FLDPLVFRPD SSLGAAGLLS VYRAGNVTIC NAIGTGVADD KSIYPYVPDM IRFYLGEEPI LNNVPTYMCR RPDDLQYVLD HMGELVVKET HGAGGYGMLV GPAATQEEIA AFREVVKARP DQYIAQPTLA LSTCPTYVEA GIAPRHIDLR PFVLSGKDVR MVPGGLTRVA LRAGSLVVNS SQGGGTKDTW VLER
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