| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1057 |
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| Symbol | |
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| ID | 8018695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1111243 |
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| End bp | 1111971 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829834 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_002981021 |
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| Protein GI | 241662661 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.441915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG CCGTCATGAC TTCCATGGAA GCGCCGGCCG CGGCGCCGCA GGGTGTGGTG
GTGCAAGCGG AAGGGCTGTC CAAGTCGTTC CGCCAGGGCG GTTTGAACGT CGATGTACTC
AAGGGTGTGG ACATCCGCAT TGGCGTGGGC GAGAAGGTCG CCATCGTCGG CGCGTCGGGC
TCAGGCAAGA GCACCTTGCT GCATGTGCTG GGCGGGCTGG ATGAACCGAC GTCGGGCCGC
GTTTCGCTGC TCGGCAAGCC GTTCACGGCC ATGAAGGAGC GCGAGCGCAA TACGCTGCGC
AACCAGGCGC TCGGCTTCGT CTATCAGTTC CACCATCTGC TGCCCGAATT CACGGCGCTG
GACAACGTCG CGATGCCGCT GCGCATCCGG GGCGTGGAAG AAGCGCAAGC GCGCCACACC
GCACAGGCGA TGCTCGAACG CGTGGGTCTG GGCCCGCGCA CGGCACACCG TCCGGGTGAG
CTGTCCGGCG GCGAGCGTCA GCGCGTGGCG ATTGCGCGCG CGCTGGTCGG GTCTCCAGCT
TGCGTGCTGG CTGACGAGCC GACCGGCAAT CTCGACGATC ACACCGCCGG TGAAGTGTTT
GACCTGATGC TGGAACTCAC GCGCACGCTG GGCACGAGCT TTGTCATCGT CACGCACGAT
ATCGAGCTGG CCGGCCGTTG CGACCGCATC TTCCGCCTGC GCGACGGCCA TCTGCACCAG
GAGCGCTAA
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| Protein sequence | MSEAVMTSME APAAAPQGVV VQAEGLSKSF RQGGLNVDVL KGVDIRIGVG EKVAIVGASG
SGKSTLLHVL GGLDEPTSGR VSLLGKPFTA MKERERNTLR NQALGFVYQF HHLLPEFTAL
DNVAMPLRIR GVEEAQARHT AQAMLERVGL GPRTAHRPGE LSGGERQRVA IARALVGSPA
CVLADEPTGN LDDHTAGEVF DLMLELTRTL GTSFVIVTHD IELAGRCDRI FRLRDGHLHQ
ER
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