Gene Rpic12D_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1053 
Symbol 
ID8018691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1106634 
End bp1106963 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID644829830 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002981017 
Protein GI241662657 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000113121 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.154101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACG TCGTTACCGA AAGCTGTGTC CGCTGCAAGT ACACCGACTG CGTGGACGTC 
TGCCCCGTCG ACTGCTTCCG CGAAGGCCCG AACTTCCTGA CCATTGATCC GGATGAGTGC
ATCGACTGCG CCGTCTGCGT GGCCGAGTGC CCGGTCAACG CTATCTACGC CGAAGAAGAC
GTGCCTGCCG ATCAGCAGAA ATGGATCGCC ATCAATGCAG AGCTGGCGCA AGCCGGCTGG
CCGTCGATCA CCAAGACCAA GCAACCCTTG CCCGACGCCG ACGACTGGAA GGACGTGAAG
GACAAGGAAC AGTATCTCGA CCGCGGCTGA
 
Protein sequence
MTHVVTESCV RCKYTDCVDV CPVDCFREGP NFLTIDPDEC IDCAVCVAEC PVNAIYAEED 
VPADQQKWIA INAELAQAGW PSITKTKQPL PDADDWKDVK DKEQYLDRG