| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1045 |
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| Symbol | |
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| ID | 8018680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1096679 |
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| End bp | 1098442 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829819 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002981009 |
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| Protein GI | 241662649 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.52657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.201232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT TCCTACCCAC CTCCGAGCAA CAGGCGATCA TCACCACGAC CGCGCTGCGC
GTTCTCGTGT CCGCTGTCGC CGGCAGCGGC AAGACTCGGA CCCTGTGCGC GCGAGCTGGT
CGTCTGACCG ATGACGGCGT GCCCCTCTCC GACATCCTGG TGCTCACCTT CTCGAACAAC
GCGGTCAACG TGCTGAAGGA ACGCCTGCCC GCCCGCATCC TGGTGAAAAC CTTTCACGCG
TTCGCCTTGA GCGTCGTGAA GCAAGCTACT GGCTCGGTCA AACTCAAGCC ACAGATGCTG
CCCCTGGCCC GCAGGGCTGA GTTGTTCTCG GGCGCCTTGT GCACCTACCC GAAGACCTGC
AGCTTGGTTC GCCGAAGGAC CGGCGTTTCG CTGAACACCA AGGGCGAGCG GAAACGGCTG
TTGGAGTTCT TCGATCGGTG CAACGGCAGC GATGATGTAG CCGCGCGTCT GGTGCAGGAT
GCTGGGTCTG GGTTCGCCTG CTACGCCGGT ATGTTGGCCG AACTGCGTAA AATCCGCCGC
GCGTACGACA AGCGCATGGA GCGAGCCGGC GCCATTGACT TCTCGACCAT GCTGACGCGC
GCAATTCCCC TTTGCGATAC CGCATCACTG CCGTTCAAGC ACCTGCTGGT TGACGAAGCG
CAGGATATGA CCGATGACCA GATGCGGCTT CTTGCTGGCC TTGCTCGTCG CATCCCCAAC
GTGATGGTGT TCGGTGACCC GCGACAGGCC ATCTACGGCT TCCTAGGTGG CCACGCTGGC
AACTTGCGCG ATGCGCTCCG TGACGCCGTG ACAATGCCGC TCTCGCGGTC GTTCCGTTTG
ACTGCGCAGA ACGCCGCGCT GGCGAACGCT ATCCTGGGCG GTGACAACCC CGTTGTTGGT
ACTCGTCACG GTGTCACACC GTCACTGCAC CGTTGCGCCT CCGCTATCGT GCAGGAAGAC
GCGGTTGTTG ATCTGGTCCG CAAGCTCAAG AGCCAAGGCG TGACGGGTAA CCAAATCGCC
GTGTTGGCGC GAACTAAAGC ACAGACCCGG CTGGTCGAAA AAGCGCTGTT GGCCGCTGGT
CACGAGATCC ATCCGGTGCA TCTGCCGCGC GAACCCGAGC ACGCCGACCG GCTGCTCGAT
ATGCTAACGC TGGCGCTGAC CTGCATCGCC ACGGCGAAGG CGGGCAACAA GCCGAATAGG
AAGTGGCGTG CCCGCCGGCT GGCGGAGATC GTTGGCAAAC CGATCCCGGC AAATCGACTG
GCACCCTGTC TCCTCATGCT CAAGAAAGCT GCCCCCGTGC CCTCCTTCCA GGGATGCTAT
ACGGTGGCCA TGCGAATCTA CCTGCGCCTG ATGCGGGAGC CGGGCAAGCC CGTCACCAAC
ATCGCCGCCG AACTCGGTCG CTGGCAACCC ATCGCCAGCA AGTTCAAGAC GGTGCAGGCG
CTGCGGTCGC ATATCGAGAC GCTGCGCGCA CAGGCACCAG TGGTCTTGTC CTCGATCCAT
GCCGCAAAGG GCGGTGAGTG GGACCACGTC ATCGTGCTGG GCGTCACGGA TGGTTCCATC
CCGTTCTATC GAGCAACCGA CTCGAACCAG ATCGCAGAGG AACGCCGCCT CTTCTACGTG
GCCGTGACGC GAGCCCGCAA GCGACTCCAC CTGTTCCATG CGCCCTTCCA TCACGCGCCG
TCGCGGCAGG CATTCACGGA GCGCTCTCGC CTCCTGACTC CCGCCGTCAT GGCGTCGTTG
CAACAGGCGG AACAACCCGG CTAG
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| Protein sequence | MNIFLPTSEQ QAIITTTALR VLVSAVAGSG KTRTLCARAG RLTDDGVPLS DILVLTFSNN
AVNVLKERLP ARILVKTFHA FALSVVKQAT GSVKLKPQML PLARRAELFS GALCTYPKTC
SLVRRRTGVS LNTKGERKRL LEFFDRCNGS DDVAARLVQD AGSGFACYAG MLAELRKIRR
AYDKRMERAG AIDFSTMLTR AIPLCDTASL PFKHLLVDEA QDMTDDQMRL LAGLARRIPN
VMVFGDPRQA IYGFLGGHAG NLRDALRDAV TMPLSRSFRL TAQNAALANA ILGGDNPVVG
TRHGVTPSLH RCASAIVQED AVVDLVRKLK SQGVTGNQIA VLARTKAQTR LVEKALLAAG
HEIHPVHLPR EPEHADRLLD MLTLALTCIA TAKAGNKPNR KWRARRLAEI VGKPIPANRL
APCLLMLKKA APVPSFQGCY TVAMRIYLRL MREPGKPVTN IAAELGRWQP IASKFKTVQA
LRSHIETLRA QAPVVLSSIH AAKGGEWDHV IVLGVTDGSI PFYRATDSNQ IAEERRLFYV
AVTRARKRLH LFHAPFHHAP SRQAFTERSR LLTPAVMASL QQAEQPG
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