| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1034 |
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| Symbol | |
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| ID | 8018669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1084573 |
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| End bp | 1085346 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829810 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002981000 |
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| Protein GI | 241662640 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.129419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGC ACAGCATCCA AGGCAAAGTC GTCCTCATCG CCGGCGGCGC TAAGAACCTG
GGCGGTCTAA TCGCCCGCGA TCTGGCTGCA CAAGGCGCCA AGGCCATCGC CATCCACTAC
AACAGCGCCA GCAGCAAGGC GGATGCGGAA AAGACCGTTG CCGCCATCGA ACAGACCGGT
GCCAAGGCCG CTGCCCTGCA GGCCGACCTG ACCACGGCTG TCGCAGTGGA AAAACTCTTT
GCCGATGCCA TCGCCGCAGT GGGCCGCCCC GACATCGCCA TCAACACCGT GGGTAAGGTG
CTCAAGAAGT CGTTCGTTGA GATCACGGAG ACCGAGTACG ACGAGATGAC GGCCGTCAAC
AGCAAGTCGG CGTTCCTCTT TCTCAGGGAA GCCGGCAAAC ACGTCAACGA CAACGGAAAG
ATCTGCACCC TGGTGACATC GCTGCTGGGC GCCTTCACGC CGTTCTATGC CGCGTATGCG
GGTACCAAGG CGCCGGTCGA GCACTTCACC CGCGCGGCGG CCAAGGAGTA CGGCGCACGC
GGCATTTCCG TCACGGCCGT GGGCCCTGGC CCGATGGATA CGCCGTTCTT CTACCCGGCC
GAAGGCGCGG ACGCCGTGGC GTATCACAAG ACTGCCGCCG CGCTGTCGCC CTTCAGCAAG
ACCGGGCTGA CCGACATTGA AGACGTGGTC CCGTTCATCC GCCACCTAGT GAGCGACGGC
TGGTGGATCA CCGGCCAGAC CATCCTCATC AACGGCGGTT ACACCACCAA GTAA
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| Protein sequence | MSQHSIQGKV VLIAGGAKNL GGLIARDLAA QGAKAIAIHY NSASSKADAE KTVAAIEQTG
AKAAALQADL TTAVAVEKLF ADAIAAVGRP DIAINTVGKV LKKSFVEITE TEYDEMTAVN
SKSAFLFLRE AGKHVNDNGK ICTLVTSLLG AFTPFYAAYA GTKAPVEHFT RAAAKEYGAR
GISVTAVGPG PMDTPFFYPA EGADAVAYHK TAAALSPFSK TGLTDIEDVV PFIRHLVSDG
WWITGQTILI NGGYTTK
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