| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1016 |
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| Symbol | |
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| ID | 8018651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1070984 |
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| End bp | 1072222 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829797 |
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| Product | integrase family protein |
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| Protein accession | YP_002980987 |
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| Protein GI | 241662627 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC AGAATGCCCG GGCTGGCAAA AGCGCCCTGA ACTTCACCAA AGCGGCTATC
GAAGCGCTGC CGGTGCCCGA GAAGGGCTGG AAGTACTACT ACGACACCAA AGTGTCGGGT
TTGGCGATCG GCATCGGAGC GAGTGGCGTG CGCACGTTCG TCCTGTACCG CAAAGTCAAC
CGCAAGCCGG AGCGCATCAA GATCGGGCGC TATCCCGATC TGACGGTGGA GAAGGCGCGC
ACGCAAGCGA TGGCGCTCAA CGGCGAAATC GCCACCGGCA CCAACCCCGC TGAGTTGAAA
CGGATACGGC GCGCTGAAAT GACGTTCGGC GATCTCTTCG ACCAGTACTA CAAGAACCAC
AGCCTGCCGA ACAAGAAGAC TTCGGACGAG GACAAGCAGA AGTTCGACCA GTACCTGTCG
AGCAACAGAG ACGGTGTCAA TCTGGCGTCG CGTCAGCTAT CGGCGATCAG TAAAGCCGAC
ATCGCCCAGT TGTTCGGCAA GATCAGCATG GAACACAAGA TCACCGCGAA CCGGGTGTTG
GCGCTGGTCA GCAGCATTTT CGGCAAGGCG ATCGAATGGG GTATCTGGAA CCAGATGAAC
CCCTGTCAGG GGATTCGCAG GAACCGCGAG AACAGCCGGG ACCGCTTTCT GCACCCGGAC
GAGTTGCCGA AATTCTTCGA GCACGTGTTG GCCTACCCGA ACGCCACGCT GCGCGACTAC
ATGCTGGTCA GCCTGCTCAC GGGTGCGCGC CGCAGCAATG TGCTGGCGAT GCGCTGGGAG
GATGTCAATC TGGAGCGCGC GGAATGGCGG ATTCACGAGA CCAAGAACGG AACTCCGCAA
AGCGTGCCGC TGGTGCCGGA TGCGGTGGCG CTGTTGCGCA ACCGTCAGGA AATGCCGGAG
TGCGAGGACT CGCCGTTCGT CTTCCCTGGT ACCGGCAAGT CGGGTCATCT TGTTGAGCCG
AAGAAAGCCT GGAAGATCGT CCTGACACAG GCTGGCATCA AGGACCTGCG GCTGCACGAT
CTGCGCCGCA CGATGGGCTC GTGGCAGGCG GGGACGGGGG CCAACTTGTC GGTGATTGGC
CGGTCGCTGA ACCACAAGTC CACGGCAACG ACCGCCATCT ACGCGCGCCT GTGGATGGAG
CCCGTACGTT CCTCGATGGA AACGGCGGCG GCAGCGATGC TGAGCGCCGC CGGCATTGAA
TCGCGCCAGG ACGCGGGAGA GCCTGCACCG CAAGATTGA
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| Protein sequence | MSEQNARAGK SALNFTKAAI EALPVPEKGW KYYYDTKVSG LAIGIGASGV RTFVLYRKVN
RKPERIKIGR YPDLTVEKAR TQAMALNGEI ATGTNPAELK RIRRAEMTFG DLFDQYYKNH
SLPNKKTSDE DKQKFDQYLS SNRDGVNLAS RQLSAISKAD IAQLFGKISM EHKITANRVL
ALVSSIFGKA IEWGIWNQMN PCQGIRRNRE NSRDRFLHPD ELPKFFEHVL AYPNATLRDY
MLVSLLTGAR RSNVLAMRWE DVNLERAEWR IHETKNGTPQ SVPLVPDAVA LLRNRQEMPE
CEDSPFVFPG TGKSGHLVEP KKAWKIVLTQ AGIKDLRLHD LRRTMGSWQA GTGANLSVIG
RSLNHKSTAT TAIYARLWME PVRSSMETAA AAMLSAAGIE SRQDAGEPAP QD
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