| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1014 |
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| Symbol | |
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| ID | 8018649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1068326 |
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| End bp | 1069534 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829795 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002980985 |
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| Protein GI | 241662625 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.303268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CACGAGCCAA ACGTGCCGTT TCGATCCGCC CGGTCTACGC ATCGGTTGCG
CTGCTCTGCG CAGGCGCTTC GATGCAGGCT GCAGCACAAA CGTCGGTCAC GCTGTATGGC
GTGGTCGATA ACGCCTTTGC CTATTCGAGC AACCAGGGCG GCCATTCCAA CACTTACATC
AACTCGGGCG CCTTGCTGGC CAGCAAGTTC GGCCTGTACG GCACGGAAGA CCTGGGCGGC
GGCAACACGG CGCTGTTCCG GCTGGAGAGC GGTCTCAACG CCGCGACGGG GCAACAATCC
CAAGCCGGGG TCATCTTTAA CCGCCAGGCC TACGTCGGCC TGAGCAACAC CAACTATGGC
CAGGTCACGC TGGGCCGTGC GTACACGCCG TACTTCCAGT ACGTGGCATC GCTGGGCCCG
ACCAACGTGC TCACGGGTGC CACTGGCGCG CACCCGGGCG ATGTCGATGC ATTGGATACC
ACGCTGCGCT TCAACAACTC CGTCACCTAC ACCACGCCGG TGCTGGGCGG TCTGCAAGCG
GGCGTGCAAT ACGGCTTTGG CGAGCAGGCC GGCAGCATTT CGAACGGCAG CAGCGTGAGC
ACCGGGCTGC GTTACGACTT CCAGGCCTTC TCGTGGGGCG TCGGCTATAC GCGCCTGAAG
AACGTGTCGA CTGGCACGAC GGCCGGCAAC TTCAGCAACG TCGGGACGTT CGCCAACAAC
TCGCCGGTCA ACGCCGGCTA TGCGACTGCA GACTCCGCGC AGCTCATCGC CACGGCCGCG
CGCTATACGT TCGGCAAGTT GATGGTTGGC CTGAACTACT CGAATGTTCA GTACAAGCCG
GGCGCGCTGT CGCTGTTCAC GCAATCGGCC ACGTTCAATA CGGTGGGCGC GATTGCCACG
TACGATCTGA CGCCCGCATT GCGGCTCGCC TTCGGCTACA GCTACACGGC TGAGAAGGCA
CGCAACGGGA TCAGCTCGCC GGCCAAGTAC AACCAGTTCT CGATGGAGCA GCTGTATTCG
CTGTCCAAGC GCACCGCGTT CTATGCGATC CAGGCGTATC AGCGCGCCAA CGGCCAGACG
CTGCGCGCTT CGGGGACGAG CACGTCCATT GTGGATGCGG TGGCGTCGGT GGGCGACTCG
CAGAACGGCA CGCCGTCGAA CGGCCGCAGC CAGTTCGTGG GCATGGTCGG CATTCGGCAT
TCGTTCTGA
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| Protein sequence | MKTTRAKRAV SIRPVYASVA LLCAGASMQA AAQTSVTLYG VVDNAFAYSS NQGGHSNTYI
NSGALLASKF GLYGTEDLGG GNTALFRLES GLNAATGQQS QAGVIFNRQA YVGLSNTNYG
QVTLGRAYTP YFQYVASLGP TNVLTGATGA HPGDVDALDT TLRFNNSVTY TTPVLGGLQA
GVQYGFGEQA GSISNGSSVS TGLRYDFQAF SWGVGYTRLK NVSTGTTAGN FSNVGTFANN
SPVNAGYATA DSAQLIATAA RYTFGKLMVG LNYSNVQYKP GALSLFTQSA TFNTVGAIAT
YDLTPALRLA FGYSYTAEKA RNGISSPAKY NQFSMEQLYS LSKRTAFYAI QAYQRANGQT
LRASGTSTSI VDAVASVGDS QNGTPSNGRS QFVGMVGIRH SF
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