Gene Rpic12D_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0999 
Symbol 
ID8018631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1048836 
End bp1049411 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content58% 
IMG OID644829778 
Productelongation factor P 
Protein accessionYP_002980971 
Protein GI241662611 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.692451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.398098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA AAATCGCGCA AGAACTCCGC GCTGGCAACG TGTTCATGAT CGGCAACGAC 
GCAATGGTCG TGCTCAAGAC CGAGTACAGC CGTTCGGGCC GCTCGGGCGC CGTCGTCAAG
ATGAAGTACA AGAACCTGCT GACGGGCGCA GGCGGCGAGT CGGTGTTCAA CGCCGACGAC
AAGATGGACC AAGTCATCCT CGAGAAGAAG GAAGCCGAGT ATTCCTACTT CGACGGCTCG
ATGTACGTGT TCATGGATCC GGTCACGTAC GAACAGTACA ACGTTGAGCC CGCCGCCATG
GGCAGCGCGC TGAACTACCT GCAAGACGGC ATGAAGGTCG AAGTGACGTT CTACAACGAG
AACGCCATCT CGGTGGAACT GCCGACCACG GTTGTCCGCG AAATTGTCTA CACCGAGCCG
GCCGTCAAGG GCGACACGTC GTCGGGCAAG GTGCTGAAGG CAGCTCGCAT CAACGACAAC
GAAGAATTCA CGATCATGGT GCCGCTGTTC TGCAACATCG GCGAGAAGAT CGAAATCGAT
ACGCGTACCG ACGAGTACCG TAGCCGCGCC AAGTAA
 
Protein sequence
MALKIAQELR AGNVFMIGND AMVVLKTEYS RSGRSGAVVK MKYKNLLTGA GGESVFNADD 
KMDQVILEKK EAEYSYFDGS MYVFMDPVTY EQYNVEPAAM GSALNYLQDG MKVEVTFYNE
NAISVELPTT VVREIVYTEP AVKGDTSSGK VLKAARINDN EEFTIMVPLF CNIGEKIEID
TRTDEYRSRA K