Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0999 |
Symbol | |
ID | 8018631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1048836 |
End bp | 1049411 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644829778 |
Product | elongation factor P |
Protein accession | YP_002980971 |
Protein GI | 241662611 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.692451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.398098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTGA AAATCGCGCA AGAACTCCGC GCTGGCAACG TGTTCATGAT CGGCAACGAC GCAATGGTCG TGCTCAAGAC CGAGTACAGC CGTTCGGGCC GCTCGGGCGC CGTCGTCAAG ATGAAGTACA AGAACCTGCT GACGGGCGCA GGCGGCGAGT CGGTGTTCAA CGCCGACGAC AAGATGGACC AAGTCATCCT CGAGAAGAAG GAAGCCGAGT ATTCCTACTT CGACGGCTCG ATGTACGTGT TCATGGATCC GGTCACGTAC GAACAGTACA ACGTTGAGCC CGCCGCCATG GGCAGCGCGC TGAACTACCT GCAAGACGGC ATGAAGGTCG AAGTGACGTT CTACAACGAG AACGCCATCT CGGTGGAACT GCCGACCACG GTTGTCCGCG AAATTGTCTA CACCGAGCCG GCCGTCAAGG GCGACACGTC GTCGGGCAAG GTGCTGAAGG CAGCTCGCAT CAACGACAAC GAAGAATTCA CGATCATGGT GCCGCTGTTC TGCAACATCG GCGAGAAGAT CGAAATCGAT ACGCGTACCG ACGAGTACCG TAGCCGCGCC AAGTAA
|
Protein sequence | MALKIAQELR AGNVFMIGND AMVVLKTEYS RSGRSGAVVK MKYKNLLTGA GGESVFNADD KMDQVILEKK EAEYSYFDGS MYVFMDPVTY EQYNVEPAAM GSALNYLQDG MKVEVTFYNE NAISVELPTT VVREIVYTEP AVKGDTSSGK VLKAARINDN EEFTIMVPLF CNIGEKIEID TRTDEYRSRA K
|
| |