| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0996 |
|---|
| Symbol | |
|---|
| ID | 8018628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1046482 |
|---|
| End bp | 1047273 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644829775 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_002980968 |
|---|
| Protein GI | 241662608 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.738489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.186929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTTC ATGCCTCGCC GGGAATCATC GACCTGGGCA TCAACATCGA CCACGTCGCT
ACGCTGCGCA ACGCGCGCGG CACCACCTAC CCGGATCCGG TCGCCGCAGC GCTCCTGGCT
GAAGAAGCCG GCGCCGATCT CATCACTCTG CACCTGCGCG AAGACCGTCG CCATATCAAG
GACGCGGATG TGCGCGCGCT GCGGCCGCAG CTGCGCACGC GCATGAACCT TGAGTGTGCT
GTCACCCAGG AGATGCTCGA CATCGCCTGC GACATCGGCC CTCAGGACGT TTGCCTGGTG
CCCGAGCGTC GTCAGGAAGT GACCACTGAA GGTGGCTTGG ACGTGGTGGG CGGTTTCGCT
AAGGTGCAAG CCGCCTGCAA GCAACTGGCC GACGCAGGCA TCCGCGTCTC GCTGTTCATC
GATCCGGATG CGGCGCAGAT CGAGGCCGCC GCCGCTGCAG GCGCCCCGGT CATCGAACTG
CACACGGGCC GCTATGCCGA AGCGACCGAC GATGCCGAGC TGCGGGCGGA ACTCGTCCGC
ATCGAGACCG CGGTGGAAGA GGGCATCCGC TGGGGCGTGC GCGTGAACGC AGGTCACGGC
CTCCACTACA CGAACGTGCA GCCGATCGCG GCCATCGCGG GCATTCATGA ACTGAATATC
GGCCACGCCG TGGTTGCGCA TGCGGTATTT GCTGGCTGGC AGAACGCGGT GCGCGAGATG
AAAGCGATCA TGGTTGCGGC ACGGCTGTCT TCCACCACGC CGGCGGCCGC ACATCCGGGC
GTGCCGGTAT GA
|
|---|
| Protein sequence | MIFHASPGII DLGINIDHVA TLRNARGTTY PDPVAAALLA EEAGADLITL HLREDRRHIK
DADVRALRPQ LRTRMNLECA VTQEMLDIAC DIGPQDVCLV PERRQEVTTE GGLDVVGGFA
KVQAACKQLA DAGIRVSLFI DPDAAQIEAA AAAGAPVIEL HTGRYAEATD DAELRAELVR
IETAVEEGIR WGVRVNAGHG LHYTNVQPIA AIAGIHELNI GHAVVAHAVF AGWQNAVREM
KAIMVAARLS STTPAAAHPG VPV
|
|---|
| |