Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0995 |
Symbol | recO |
ID | 8018627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1045664 |
End bp | 1046485 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829774 |
Product | DNA repair protein RecO |
Protein accession | YP_002980967 |
Protein GI | 241662607 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.212682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0801733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGAC GATCCGATCC GATTCCGGAC GAAGCCGCGG AATGGCTGGC CGAAGAAGGC GTTGCCGGCG CCGCGCCGCG TAAGAGCTTT CCTGCGGGGC GCTCCGAAAC ACGCGTTGCT GCGCAGCCGG CTTTCGTGCT GCACAGTTAC CCGTATCGGG AAACCAGCCT CATCATCGAT GTCTTCACGC CGGATTACGG GCGCATGGCG CTGGTCGCCA AGGGAGCCAA GCGGCCGCAT TCGGCGCTGC GTGCGGTGCT GCAGACCTTC CAGCCGCTGT CGCTGTCCTG GAGCGGCCGC GGCGATGTGC GCACGCTGAC CCGTGCCGAG TGGGTCGGCG GCATGCTGCC GCTGGGCGGG GAGGGACTGC TTTCCGGGTT CTATCTGAAC GAACTGCTCG TCAAGTTTGT CGCACGCGAA GACGGCCACC CGGTGCTGTT CGCGCATTAC GTTGAAACGC TCAATAAGCT CGCCCATGGC GAACCTGCGG CCTTTACGCT GCGCGCGTTC GAACGTGTGC TCCTCCGTGA GACCGGCTTT GCTGCACAGC TTGATCGCTG TATCGACGGC GAACCCGTGC AGGCCGATGC CGAATACGTC TATCACCCTG AGCGAGGCAT CCGGCGCACG CTGCCGAGCG ATCCATCGTC CTGGCCCGTC TTGCGCGGCC AGACGCTGAT TGACATGGAG CGGGACGATT ACGGTTCACG CCCGACGACC GCGCAGCAAA GCCGCAGCCT GATGCGTTTC CTGCTGCATT ATCATTTGCA TGGCACGCCG CTTTCGACGC GCCAGATCCT GATCGACTTG CAGAAACTAT GA
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Protein sequence | MAGRSDPIPD EAAEWLAEEG VAGAAPRKSF PAGRSETRVA AQPAFVLHSY PYRETSLIID VFTPDYGRMA LVAKGAKRPH SALRAVLQTF QPLSLSWSGR GDVRTLTRAE WVGGMLPLGG EGLLSGFYLN ELLVKFVARE DGHPVLFAHY VETLNKLAHG EPAAFTLRAF ERVLLRETGF AAQLDRCIDG EPVQADAEYV YHPERGIRRT LPSDPSSWPV LRGQTLIDME RDDYGSRPTT AQQSRSLMRF LLHYHLHGTP LSTRQILIDL QKL
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