Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0991 |
Symbol | |
ID | 8018623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1042587 |
End bp | 1043480 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644829770 |
Product | signal peptidase I |
Protein accession | YP_002980963 |
Protein GI | 241662603 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0050867 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.048804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTCG CCCTGATTCT GTTTGTTCTC GTCGTACTCA CCGGCATTGC TTGGGTGGCT GACAAGCTCG TGTTCCAGCG CCAGCGCCAG GCGGCCGCAG CCGCGGCGCT GGCTGAATTT GATGCGCGCG CGCAGGTGCA GGCGCAATAT GGCGGTGGAG GTGACATCGG TGCAGCCCGT TTGCAACTGG CCGAAGACAA GCTGCGCCAG CCTTGGTGGC TGGAGTACAC CGCCAGCTTC TTCCCAGTGA TTGCCGCGGT GTTCCTCTTG CGCTCGTTCG TGATTGAACC GTTCAAGATT CCGTCGGGCT CGATGATTCC GACGCTGCAG ATCGGCGACT TCATCCTCGT CAACAAGTAC ACGTATGGCG TTCGCTTGCC GATCGTGAAC AAGAAGATCG TGGAGCTAAA CGAGCCACAA CGCGGCGACG TGATGGTCTT CCGCTACCCG AAAGACGAGT CGATGGACTA CATCAAGCGC GTGATCGGCG TGCCCGGCGA CGTGGTGAAG TACGACAACA AGCGCTTGAC GGTGAACGGC CAGCCGGCCA CCTACGCGCC GCAGTCAGAC TACCTTGATG GTGAACGCCT GACGTATTCG AAGCAGTACC AGGAGACGCT GGGCAACGTC ACGCACAACA TCCTGAACGA CGCCGACCGC CCGGCGTATG TTTCGGGCCC GGACGATTTT CCGTTCCGCG AAAACTGCAC ATACAATCAG ACCGGCTTTA CCTGCAAGGT ACCTGCAGGT CACTATTTCA TGATGGGCGA TAATCGCGAC AACAGCGCGG ATTCCCGTTA CTGGGGCTTC GTGCCAGACA AGAACATCGT CGGGAAGGCA TTCTTCATCT GGATGAATCT GGGTGATCTG AAGCGGATCG GTGCTTTCCA CTGA
|
Protein sequence | MNFALILFVL VVLTGIAWVA DKLVFQRQRQ AAAAAALAEF DARAQVQAQY GGGGDIGAAR LQLAEDKLRQ PWWLEYTASF FPVIAAVFLL RSFVIEPFKI PSGSMIPTLQ IGDFILVNKY TYGVRLPIVN KKIVELNEPQ RGDVMVFRYP KDESMDYIKR VIGVPGDVVK YDNKRLTVNG QPATYAPQSD YLDGERLTYS KQYQETLGNV THNILNDADR PAYVSGPDDF PFRENCTYNQ TGFTCKVPAG HYFMMGDNRD NSADSRYWGF VPDKNIVGKA FFIWMNLGDL KRIGAFH
|
| |