| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0988 |
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| Symbol | |
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| ID | 8018620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1038757 |
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| End bp | 1040268 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829767 |
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| Product | protease Do |
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| Protein accession | YP_002980960 |
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| Protein GI | 241662600 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0294533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCG CTCGAACCGT TCACGCTTTG CGTCTACTGT GCATTGCCGC CGCCTTGGCG
GTCGGGAGCG CGCTGACACC CGCCCACGCC CAGAACGCCA TGGGTAGCGT GGCTACGGGC
ACGTATGGCC TTCCCGATTT TGCCGATCTG GTCGAGAAAG TCAGCCCCGC TGTCGTCAAC
ATCCGCACGA CCGAAAAGGT CCGTATGCAG CAGGGTGGTC CGAACGATGA CGACATGGCC
GAGTTCTTCC GCCGCTTCTT TGGTGTGCCG ATGCCTGGCA TGCCCGGGCA GGGCCAGAAG
CGCCGCAACG CGCCGCCCCA ACAGGAAGAG GAGCAGAGCC GTGGCGTCGG TTCCGGCTTC
ATCATCTCGG GTGACGGCTA CATTTTGACC AACGCGCATG TGGTGGAAGG CGCGGAAACC
ATCTACGTCA CGCTGATCGA CAAACGCGAG TACAAAGCCA AGCTGATCGG CCTGGACAAA
CGCACCGATG TAGCGCTCGT CAAGGTGGAG GCGACGGGGT TGCCCAGCCT GAAGCTCGGC
GATTCCGACA AGGTGCGCGT TGGCGAGTGG GTGCTTGCGA TTGGTTCTCC GTTTGGTCTC
GACAATACGG TGACGGCGGG CATTGTGTCG GCCAAGGGAC GCGATACCGG CGACTACCTG
CCGTTCATCC AATCCGATGT GGCTGTCAAC CCAGGCAACT CGGGCGGCCC GCTGATCAAC
CTGCGTGGTG AGGTGATCGG CATCAACAAC CAGATCTACA GCCAGAGCGG CGGCTACATG
GGTATCTCGT TCTCGATCCC GATCGACGAG GCGATGCGTG TGGCTGAGCA GTTGAAGGCG
ACGGGGCGCG TGACACGCGG CCGCATCGGT GTGGCAATCG ACAACGTGCC GAAGGATGCA
GCGGAGTCGC TGGGTCTGGG CCGTGCGCGC GGCGCCTATG TCGGCAATGT CGAGTCGGGT
GGGCCTGCAG ACAAGGCCGG CATCGAGGCT GGTGACATCG TCTTGAAGTA CAACGGCCGC
GATATCGAGA AGGCGGGAGA CTTGCAGCGC CAGGTCGGCG AGACCAAGCC GGGCACGCGC
GCAACCGTGC AGGTCTGGCG CAAGGGCGCA ACGCGCGATC TGACCGTGAC GGTCGCCGAG
TTGCAGGCCG ATACGAAGGT GGCGCAGCGC TCCAAGGGCG CGCAGCCTGA TAACAGCCAG
CAGGGCCCGG GCAAGCCGAA TGCCCTCGGG CTGGTGGTGT CGGACTTGTC CGACGGCGCG
CGTCGCGAGT TCAAGACCAA GAGTGGCGTT GAGGTGCAGG TGTCGGAAGG ACCGGCGGCG
CGTGTCGGCA TTCGCCCAGG CGATCTGATC CTGCGTGTCG GCGATACGGA TGTCACCAAC
GCCAAGCAGT TCAACGAGCT GGTCGCCAGG CTCGACAAGA ACCGCATGGT TGCCGTGTTT
GTACGCCGCG GTGACGCCAC GCAGGTCGTG ACGCTGCGCC CGAGCGCAGC CCGCTCGGGA
AGTGGTCAGT GA
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| Protein sequence | MRTARTVHAL RLLCIAAALA VGSALTPAHA QNAMGSVATG TYGLPDFADL VEKVSPAVVN
IRTTEKVRMQ QGGPNDDDMA EFFRRFFGVP MPGMPGQGQK RRNAPPQQEE EQSRGVGSGF
IISGDGYILT NAHVVEGAET IYVTLIDKRE YKAKLIGLDK RTDVALVKVE ATGLPSLKLG
DSDKVRVGEW VLAIGSPFGL DNTVTAGIVS AKGRDTGDYL PFIQSDVAVN PGNSGGPLIN
LRGEVIGINN QIYSQSGGYM GISFSIPIDE AMRVAEQLKA TGRVTRGRIG VAIDNVPKDA
AESLGLGRAR GAYVGNVESG GPADKAGIEA GDIVLKYNGR DIEKAGDLQR QVGETKPGTR
ATVQVWRKGA TRDLTVTVAE LQADTKVAQR SKGAQPDNSQ QGPGKPNALG LVVSDLSDGA
RREFKTKSGV EVQVSEGPAA RVGIRPGDLI LRVGDTDVTN AKQFNELVAR LDKNRMVAVF
VRRGDATQVV TLRPSAARSG SGQ
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