Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0986 |
Symbol | |
ID | 8018618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1036933 |
End bp | 1037565 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829765 |
Product | anti sigma-E protein, RseA |
Protein accession | YP_002980958 |
Protein GI | 241662598 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.99218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.105676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGG CTCAATTGCA AACAGCAGAA GCGGAGTTCG CGCAGCGCAT CTCTGCTTTG ATGGACGGCG AAGTCGCGGC GCACGAGGTG TCGTCTGCGG TCGAGCTCGC CAAGGATGGT GAGGGCGCTG CGCATTGGCG CGAATATCAG CTGATCGGAG ACGTGCTCCG GTCGGAAGAT CTTCTGAACA CGCTTTCCTC AGAAGATTTC GTCAGCCGGT TCTCGGCCAA GCTCGACGCT GAGCCGCATC TGCTGGTGCC GGCTGTGGCA CAGCGCGCGA AAGCCCAGCA GAGGCACCGC TTCCTGGTCA GCCCCGCTTG GGTCCGCCGT ATCATGCCGA CGACCGCGGT GGCGGCGGCG GTGGCGGCCG TTAGCTGGGT TGTCGTGCCG CAGTTGCGCG GTCCTGCCGA TGGTGCCGAC GGCTCTCCCG CGTTGGTCGC CAAAGCGACG CAGGGCGGCG GCGCGCAGGC GCTGACCGTG GCGGCCACCG ACAATACGCC AATGATCCGT GATGCCCGTC TGGACGAATA TTTGAGCGCT CATCGCCAGT CGGCAACCAA CGGTATGGTG GTTCCTTATC TGCGTGCAGT GGCCAACGGG GTGGCGAACA CCCAGGACTC CAATCAGGAA TAA
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Protein sequence | MGQAQLQTAE AEFAQRISAL MDGEVAAHEV SSAVELAKDG EGAAHWREYQ LIGDVLRSED LLNTLSSEDF VSRFSAKLDA EPHLLVPAVA QRAKAQQRHR FLVSPAWVRR IMPTTAVAAA VAAVSWVVVP QLRGPADGAD GSPALVAKAT QGGGAQALTV AATDNTPMIR DARLDEYLSA HRQSATNGMV VPYLRAVANG VANTQDSNQE
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