Gene Rpic12D_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0986 
Symbol 
ID8018618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1036933 
End bp1037565 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID644829765 
Productanti sigma-E protein, RseA 
Protein accessionYP_002980958 
Protein GI241662598 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.99218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.105676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGG CTCAATTGCA AACAGCAGAA GCGGAGTTCG CGCAGCGCAT CTCTGCTTTG 
ATGGACGGCG AAGTCGCGGC GCACGAGGTG TCGTCTGCGG TCGAGCTCGC CAAGGATGGT
GAGGGCGCTG CGCATTGGCG CGAATATCAG CTGATCGGAG ACGTGCTCCG GTCGGAAGAT
CTTCTGAACA CGCTTTCCTC AGAAGATTTC GTCAGCCGGT TCTCGGCCAA GCTCGACGCT
GAGCCGCATC TGCTGGTGCC GGCTGTGGCA CAGCGCGCGA AAGCCCAGCA GAGGCACCGC
TTCCTGGTCA GCCCCGCTTG GGTCCGCCGT ATCATGCCGA CGACCGCGGT GGCGGCGGCG
GTGGCGGCCG TTAGCTGGGT TGTCGTGCCG CAGTTGCGCG GTCCTGCCGA TGGTGCCGAC
GGCTCTCCCG CGTTGGTCGC CAAAGCGACG CAGGGCGGCG GCGCGCAGGC GCTGACCGTG
GCGGCCACCG ACAATACGCC AATGATCCGT GATGCCCGTC TGGACGAATA TTTGAGCGCT
CATCGCCAGT CGGCAACCAA CGGTATGGTG GTTCCTTATC TGCGTGCAGT GGCCAACGGG
GTGGCGAACA CCCAGGACTC CAATCAGGAA TAA
 
Protein sequence
MGQAQLQTAE AEFAQRISAL MDGEVAAHEV SSAVELAKDG EGAAHWREYQ LIGDVLRSED 
LLNTLSSEDF VSRFSAKLDA EPHLLVPAVA QRAKAQQRHR FLVSPAWVRR IMPTTAVAAA
VAAVSWVVVP QLRGPADGAD GSPALVAKAT QGGGAQALTV AATDNTPMIR DARLDEYLSA
HRQSATNGMV VPYLRAVANG VANTQDSNQE