| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0985 |
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| Symbol | |
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| ID | 8018617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1036226 |
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| End bp | 1036825 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644829764 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_002980957 |
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| Protein GI | 241662597 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.664585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0675077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAC GCGAAGCCGA CCAGATCCTC GTCGAGCGCG TCCAGCAAGG CGACAAGCGA
GCATTTGAAC TGCTGGTGGT CAAGTATCAC CGGAAGATCA TTCGGCTCGT TTCCCGCCTG
ATCCGTGACC CGGCCGAAGT CGAGGATGTG GCACAGGATG CCTTTATCAA GGCCTACCGT
GCGTTGCCCC AGTTCCGGGG GGAATCCGCG TTCTATACGT GGCTGTATCG CATCGCCGTC
AACACGGCAA AGAATTACCT GGCGACGCAG GGTCGGCGCC CTGAATCGTC TAGCGACATC
GACACCGAAG AGGCTGAAAC TTTTGCCGAC GGTGAGCTAC TAAGGGATAT CAATACGCCG
GACTCCATGT TGCACACCAA GCAGGTGGCC GAAACGGTCA ACCGTGCAAT GGAAGCGCTG
CCCGAAGAAT TGCGTACTGC AATCACACTG CGGGAGATCG AGGGTCTGAG CTATGAGGAA
ATCGCTGAGG CAATGGAATG CCCGATCGGC ACGGTCCGGT CCCGCATTTT CCGGGCGCGC
GAGGCGATTG CCGAGAAATT GCGCCCCCTG CTGGGAACAG TGGAGGGCAA ACGGTGGTAG
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| Protein sequence | MSEREADQIL VERVQQGDKR AFELLVVKYH RKIIRLVSRL IRDPAEVEDV AQDAFIKAYR
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRPESSSDI DTEEAETFAD GELLRDINTP
DSMLHTKQVA ETVNRAMEAL PEELRTAITL REIEGLSYEE IAEAMECPIG TVRSRIFRAR
EAIAEKLRPL LGTVEGKRW
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