Gene Rpic12D_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0975 
Symbol 
ID8018607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1027501 
End bp1028232 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID644829754 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_002980947 
Protein GI241662587 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0641605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTA CGCTTTATCT CATCCCGAAT ACGCTAGGCA CGCGCGATGC GGCCGACCCG 
CTGCCTGACG TGATTCCTGC CGGCGTGCAG CAGATCACTG CGCGCCTCGA TTACTTTGTC
GCCGAGCACG CCAAGACCGC ACGCGCGTTG CTGAAAAAGC TGGCCGAGAC CACGCCGCTG
GCACGTCCAC TGCAGGAAAT CACCATCCGC GAGCTGAACG TCAAAACGCC TGAATCGGAA
CTGGAAGCAC TGTTGGCGCC GGTGGTCGCG GGCCAGGACG CGGGGCTGAT GTCGGAAGCC
GGCGTGCCGG CGGTGGCCGA TCCGGGCGCG AATCTCGTGC GCCTCGCGCA CCGACGCGGC
GTGCGCGTCA AGCCGCTAGT GGGACCGAGT TCGATTCTGC TGGCGGTGAT GGCGTCCGGC
CTGAACGGCC AGAGTTTTGC GTTCACCGGC TACCTGCCGG TCGATGCAGC CGAGCGCAAG
ACCAAGCTGC GCGCACTGGA ACAGCTCTCG CGCTCAGCCG CCCAAACGCA GGTTTTCATT
GAAACGCCTT ACCGCAATGG CGCGTTGCTT GAAGCCATTC AGGCCGGCTG CGCGCCGAGT
ACGCTGCTGT CGATTGCAGT GGACCTGACA CTGCCCAGCG AGCAGGTTGT CACGTTGCCC
GTGAGCGACT GGCGCGCCGA CCGCATGAAC CTGCATAAGC GGCCGGCAAT CTTCTCGCTG
CTGGCGCGAT AG
 
Protein sequence
MAGTLYLIPN TLGTRDAADP LPDVIPAGVQ QITARLDYFV AEHAKTARAL LKKLAETTPL 
ARPLQEITIR ELNVKTPESE LEALLAPVVA GQDAGLMSEA GVPAVADPGA NLVRLAHRRG
VRVKPLVGPS SILLAVMASG LNGQSFAFTG YLPVDAAERK TKLRALEQLS RSAAQTQVFI
ETPYRNGALL EAIQAGCAPS TLLSIAVDLT LPSEQVVTLP VSDWRADRMN LHKRPAIFSL
LAR