Gene Rpic12D_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0963 
Symbol 
ID8018595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1012834 
End bp1014243 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content61% 
IMG OID644829742 
Producthypothetical protein 
Protein accessionYP_002980935 
Protein GI241662575 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.788665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0604629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCC TTTGGCCCCT TGTCTTCCTG TTCGTCTGTG GCCTGGCGCG CGCTGCTGAT 
GTGAGCGGCG CTGAGTTGCA CCTGTTGTGG GGTGTGCCGT TTGCGGGCAT CCTGCTCTCG
ATTGCCATTG CACCGCTCAT GATGCCCAAG CTATGGCACG ACCATTACGG CAAGATCGCA
GCGTCTTGGG CATTGGTGCT TCTGGTGCCG TTCGGGATCG CGTTTGGCTC GCAGGCGGCC
ATCGCTTCCG TTAGTCACGC AGCCCTTGCT GAATACATTC CCTTCATCGC GCTGATCGCC
GCTTTGTACG TTGTTGCAGG CGGTATCTGC ATTCGCGGCA ATCTGCATGG AACGCCAAAG
CTCAACACGG GCTTGATCGC GCTTGGTACG GCGCTGGCCA GCATCATGGG CACGACCGGC
GCCGCGATGC TGCTGATCCG GCCTTTGCTG CGCGCCAACG AGGCTCGCCG GCATCGAGCG
CACGTCGTCG TGTTCTTCAT CTTTCTGGTG GCCAATGCAG GCGGGGCCCT TACGCCGCTG
GGCGATCCGC CGCTCTTCCT CGGCTTCTTG CAGGGCGTGG ATTTCTTCTG GACCGCGCAA
TATCTGTGGC GCCAGACGTT GACGATGTGG GTGCTGCTGC TGGCGATCTT CTTCGTTATC
GACAGCTATT TCTATCACAC GGGCAAGGAA GAACTGCCCA ACATCACCGA CGCCTCGCCG
GATGATGCGG GCCCGCTGCG CTTCGAGGGC AACGTCAACT TTGTGCTGCT GGCGGGCATT
CTCGGCCTCG TGCTGATGAG CGGGCTGTGG AAGCCCGGCA TCATCTTCCA CGTGATGGGT
ACCGAGGTGA TGCTGCAGAA CGTGGTACGC GACGTCGGGC TGGTCGTCAT CGCGCTGCTT
TCGTTGTGGC TCACCCCGGC AAGCGCGCGC GCCGGCAACG AGTTCAACTG GGAGCCCATC
CTGGAAGTCG CCAAGCTGTT CGCCGGCATC TTCGTCACCA TCGGGCCCGT GATTGCCATG
CTCAAGGCCG GCGTGGACGG CCCGTTTGCG GGCATCGTCC ATCTCGTCAA CGACAGCGCG
GGCCAGCCGA ACAACGCGAT GTACTTCTGG GCGACGGGGT TGCTATCGTC GTTTCTGGAC
AATGCGCCGA CGTATCTGGT GTTCTTCAAT ACCGCTGGCG GTGACGCTTC CATGCTGATG
AGCGAGGGCG CCTCCACGCT GGCCGCGATT TCCGCCGCGG CCGTCTTCAT GGGCGCCAAC
ACCTACATCG GCAACGCGCC CAACCTGATG GTGAAGGCCA TCGCCGAAAG CCGCGGCTTG
CAGATGCCCA GCTTCTTTGG CTACATGCTG TGGTCCGTGT GCATTCTCTT GCCGATTTTC
GTTCTGATGA CCTTCGTCTT CTTCCGCTAA
 
Protein sequence
MKRLWPLVFL FVCGLARAAD VSGAELHLLW GVPFAGILLS IAIAPLMMPK LWHDHYGKIA 
ASWALVLLVP FGIAFGSQAA IASVSHAALA EYIPFIALIA ALYVVAGGIC IRGNLHGTPK
LNTGLIALGT ALASIMGTTG AAMLLIRPLL RANEARRHRA HVVVFFIFLV ANAGGALTPL
GDPPLFLGFL QGVDFFWTAQ YLWRQTLTMW VLLLAIFFVI DSYFYHTGKE ELPNITDASP
DDAGPLRFEG NVNFVLLAGI LGLVLMSGLW KPGIIFHVMG TEVMLQNVVR DVGLVVIALL
SLWLTPASAR AGNEFNWEPI LEVAKLFAGI FVTIGPVIAM LKAGVDGPFA GIVHLVNDSA
GQPNNAMYFW ATGLLSSFLD NAPTYLVFFN TAGGDASMLM SEGASTLAAI SAAAVFMGAN
TYIGNAPNLM VKAIAESRGL QMPSFFGYML WSVCILLPIF VLMTFVFFR