Gene Rpic12D_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0962 
Symbol 
ID8018594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1011975 
End bp1012694 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID644829741 
Productprotein of unknown function DUF162 
Protein accessionYP_002980934 
Protein GI241662574 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.898925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0872687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAC AACCGGACAC CCCCGTCGAC CCGCTCGACA CCAGCCGCGC CCGCGACGCC 
ATCTTTGCGC GCATCCGCAA TGCGCAGCAT CGTCCCGCGA AACCGACGCA GGGTGAGCGC
GATGCCGTGG CGGATTACCT CGCGCGCCAC CCCGCCGGCC CGCGCCCGCC GGTGCCGGAA
AACCTTGCCG CGCATTTTGC CGAGCAGGCG CTGAAGATGG CTTCCACGCT GGATACCGTG
GAGGCGCTGT CCGACGTGCC GGGCGCGGTG GCCCGTTACT TGTCTGGGCT GAACCTCCGG
CCGCAGGCCG TGGCCTGGAC TACGTTGGAA TCACTGGACT GGGCCGCTGC CGGCATCGGC
ATCGAATTCC GTCCGCCGGT GCGCGAGGCG CAAGCCGATC AGGAGCACGG CGATCTCGTC
GGCATCACGG GTTGCTTCTG CGCGATTGCT GAGACGGGCT CGCTGATGCT GCTGTCGGGG
CCGGAGAACG TTGCTTCCAC GGCGCTGCTG CCCGAGACGC ATATCGCCGT GGTTCCGCAG
TCGCGCATCG TCGCCAATCT GGAAGATGCC TATTCGCTGA TGCGCGCGGA GCGCGGCGAG
TTGCCACGCG CCACCAACGT CATCAGCGGG CCGTCGCGCA CGGGGGATAT CGAGCAGACC
ATCGTGCTCG GCGCACATGG CCCGTATCGG GTGCATGTGA TCGTGGTGTC GACTGCCTGA
 
Protein sequence
MESQPDTPVD PLDTSRARDA IFARIRNAQH RPAKPTQGER DAVADYLARH PAGPRPPVPE 
NLAAHFAEQA LKMASTLDTV EALSDVPGAV ARYLSGLNLR PQAVAWTTLE SLDWAAAGIG
IEFRPPVREA QADQEHGDLV GITGCFCAIA ETGSLMLLSG PENVASTALL PETHIAVVPQ
SRIVANLEDA YSLMRAERGE LPRATNVISG PSRTGDIEQT IVLGAHGPYR VHVIVVSTA