Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0962 |
Symbol | |
ID | 8018594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1011975 |
End bp | 1012694 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829741 |
Product | protein of unknown function DUF162 |
Protein accession | YP_002980934 |
Protein GI | 241662574 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.898925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0872687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCAC AACCGGACAC CCCCGTCGAC CCGCTCGACA CCAGCCGCGC CCGCGACGCC ATCTTTGCGC GCATCCGCAA TGCGCAGCAT CGTCCCGCGA AACCGACGCA GGGTGAGCGC GATGCCGTGG CGGATTACCT CGCGCGCCAC CCCGCCGGCC CGCGCCCGCC GGTGCCGGAA AACCTTGCCG CGCATTTTGC CGAGCAGGCG CTGAAGATGG CTTCCACGCT GGATACCGTG GAGGCGCTGT CCGACGTGCC GGGCGCGGTG GCCCGTTACT TGTCTGGGCT GAACCTCCGG CCGCAGGCCG TGGCCTGGAC TACGTTGGAA TCACTGGACT GGGCCGCTGC CGGCATCGGC ATCGAATTCC GTCCGCCGGT GCGCGAGGCG CAAGCCGATC AGGAGCACGG CGATCTCGTC GGCATCACGG GTTGCTTCTG CGCGATTGCT GAGACGGGCT CGCTGATGCT GCTGTCGGGG CCGGAGAACG TTGCTTCCAC GGCGCTGCTG CCCGAGACGC ATATCGCCGT GGTTCCGCAG TCGCGCATCG TCGCCAATCT GGAAGATGCC TATTCGCTGA TGCGCGCGGA GCGCGGCGAG TTGCCACGCG CCACCAACGT CATCAGCGGG CCGTCGCGCA CGGGGGATAT CGAGCAGACC ATCGTGCTCG GCGCACATGG CCCGTATCGG GTGCATGTGA TCGTGGTGTC GACTGCCTGA
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Protein sequence | MESQPDTPVD PLDTSRARDA IFARIRNAQH RPAKPTQGER DAVADYLARH PAGPRPPVPE NLAAHFAEQA LKMASTLDTV EALSDVPGAV ARYLSGLNLR PQAVAWTTLE SLDWAAAGIG IEFRPPVREA QADQEHGDLV GITGCFCAIA ETGSLMLLSG PENVASTALL PETHIAVVPQ SRIVANLEDA YSLMRAERGE LPRATNVISG PSRTGDIEQT IVLGAHGPYR VHVIVVSTA
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