Gene Rpic12D_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0960 
Symbol 
ID8018592 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1009430 
End bp1010534 
Gene Length1105 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID644829739 
Producthypothetical protein 
Protein accessionYP_002980932 
Protein GI241662572 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0655613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG AACGCCTCAA TGCCATCCAG AACACGTTGG CCGACCTGAA GTCGCGCGCC 
GACGACCTTC GGAGGTATCT TTGACTACGA CGTCAAATCT GAACGTCTAG TCGAAGTCGA
CAAGGAACTC GAAAACCCCG AGGTCTGGAA CGATCCCAAA CGCGCCCAGG AGTTGGGCCG
CGAGAAGAAG TCGCTTGAAA CCGTCGTGCT GGCGCTGACC AAGCTCGACG AAGATCTCAC
CGGCGCCGCC GAACTGTTCG AGCTCGCCCG CGAAGAGGGC GACGACGAGA CCATCGAAGC
CATCGAGGCT GACACCGCAG GCATGCGCGC CATCGTCGAA GACATGGAGT TCCGCCGCAT
GTTCTCCGGA CCGATGGACG CTGCCAACTG CTTTATCGAC ATCCAGGCCG GCGCGGGGGG
CACCGAAGCG TGCGACTGGG CGTCGATGCT GCTGCGCCAG TACCTGAAGT ACTGCGAGCG
CAAGGGTTTC AAGACCGAAG TCCTGGAAGA ATCCGAAGGC GACGTGGCCG GCATCAAGAG
CGCGTCGATC AAGGTCGAGG GCGAATACGC GTTTGGCTTC CTGCGCACCG AAACCGGCGT
GCACCGTCTG GTGCGCAAAT CGCCGTTCGA CTCGGCGGGT GGCCGCCACA CATCGTTCTC
GTCGATCTTC GTGTATCCGG AAGTCGATGA TTCGATCGAG ATCGAGATCA ACCCGGCGGA
CCTGCGCGTC GATACGTATC GCGCTTCGGG TGCGGGTGGT CAGCACATCA ACAAGACTGA
TTCGGCCGTG CGGATTACGC ACATCCCGAC CGGCATCGTC GTGCAGTGCC AGAACGACCG
CTCGCAGCAC CGCAACCGTG CCGAGGCGAT GACGATGCTG AAGTCGCGCC TGTATGAGCA
CGAACTGCGC AAGCGTCAGG CCGCTGCCGA CGCGCAGGAA GCCGCCAAGA CCGACGTGGG
CTGGGGCCAT CAAATCCGCT CGTACGTGCT GGACCAGAGC CGCATCAAGG ATCTGCGCAC
CAACGTGGAA ATCTCCAACA CGCAGAAGGT GCTGGACGGC GACCTTGACC CGTTCATTCA
GGCCAGCCTG AAGCAGGGCG TCTGA
 
Protein sequence
MEAERLNAIQ NTLADLKSRA DDLRRYLDYD VKSERLVEVD KELENPEVWN DPKRAQELGR 
EKKSLETVVL ALTKLDEDLT GAAELFELAR EEGDDETIEA IEADTAGMRA IVEDMEFRRM
FSGPMDAANC FIDIQAGAGG TEACDWASML LRQYLKYCER KGFKTEVLEE SEGDVAGIKS
ASIKVEGEYA FGFLRTETGV HRLVRKSPFD SAGGRHTSFS SIFVYPEVDD SIEIEINPAD
LRVDTYRASG AGGQHINKTD SAVRITHIPT GIVVQCQNDR SQHRNRAEAM TMLKSRLYEH
ELRKRQAAAD AQEAAKTDVG WGHQIRSYVL DQSRIKDLRT NVEISNTQKV LDGDLDPFIQ
ASLKQGV