| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0948 |
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| Symbol | |
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| ID | 8018580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 999955 |
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| End bp | 1000548 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829727 |
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| Product | transcriptional regulator, BadM/Rrf2 family |
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| Protein accession | YP_002980920 |
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| Protein GI | 241662560 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.636464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0187276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTGA CCACCAAAGG CCGCTTCGCG GTCACCGCCA TGATTGACTT GGCGCTGCGC
CAAGAGCAGG GCCCGGTCAC GCTGGCCGGC ATCAGCCAGC GTCAGAAAAT TTCGCTGTCG
TATCTGGAGC AGCTGTTCGG CAAACTGCGC CGCCACGAAA TCGTGGAAAG CGTGCGCGGC
CCGGGCGGCG GCTACAGCCT CGCGCGCCGC GCCGACGACG TGACCGTTGC CGACATCATC
ATTGCCGTGG ATGAGCCGCT CGATGCGACC CAATGCGGCG GCAAGGGCAA CTGCGGCGGC
GAAGAGCATG TCGGTGGCCA TACGGGCCGC TGCATGACGC ACGACCTGTG GGCCACACTC
AATCAGAAGA TGGTCGAGTA TCTCGATTCG GTGTCGCTGC AGAACCTGGT CGATCAGCAA
CGCGAGCGTC AGCCCGAAGT GATCCAGGAC ATGCGTGAAG CGCGTCCGGC TCGCCGCGAA
CGCACACCGA CACGCGCCCG CGCCGTTGAT ACGCCGGCTA CCACGTCGGT GGCCGCCGAG
CCCGTCAAGC GAGCACCGCT GGTCAACTCC GTTTTCAGTC TGGCGCAGTC GTGA
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| Protein sequence | MRLTTKGRFA VTAMIDLALR QEQGPVTLAG ISQRQKISLS YLEQLFGKLR RHEIVESVRG
PGGGYSLARR ADDVTVADII IAVDEPLDAT QCGGKGNCGG EEHVGGHTGR CMTHDLWATL
NQKMVEYLDS VSLQNLVDQQ RERQPEVIQD MREARPARRE RTPTRARAVD TPATTSVAAE
PVKRAPLVNS VFSLAQS
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