Gene Rpic12D_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0943 
Symbol 
ID8018575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp993903 
End bp994868 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID644829722 
Productribokinase 
Protein accessionYP_002980915 
Protein GI241662555 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.826251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.172047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCCA AGCGCCCTTC CGCCTCTTCC GCGCACCCCG CTGCCGACGT GCTGATCGTC 
GGCAGCCTGA ACATGGATCT CGTGATCCGC ACGCCCCGCT TGCCGCGTCC CGGGCAAACG
GTTGCAGCCC CTGCGCTGGA AACCATCCCC GGCGGCAAGG GCGCCAACCA GGCCGTGGCA
GCCGCACGCC TGGGGGCCCG TGTCGCCATG CTCGGCTGCG TGGGTGATGA CGCGTACGGC
ACCGCGTTGC GCGAGGGCCT GCGCCGCGAA GGCGTGGACA CATCGATGGT GTCGGTGCAC
GCCGGAGCGG CCACCGGCAT TGCGTGCGTG ACCGTGGCCA ACAGCGGCCA GAACACCATC
GTCATCGTGG CCGGCGCCAA CGAAATGCTG ACGCCAACGA TGATCGAAGC GCAGCGTGCC
GCGTTCGAGC GCGCACGCGT GATCGTCTGT CAGTTGGAAT CACCACCGGA TGCGGTGGAA
TGCGCGCTCA AGCTGGGCCA GCGGCTTGGC AAGACGGTCA TCCTGAATCC GGCACCTGCG
ATCGGTCCAT TGCCGACCCC GTGGCTCGCC GCCTGCGATT ACCTGATCCC GAATGAAACC
GAAGCCGCGT TGCTCACAGC GCGGCCGGTC GATTCGCCGG AAGCGGCTCT GGATGCCGCC
GCGGATCTCC ACGCGCAAGG TGCGCGGCAC GTGATTGTCA CGCTGGGCGC GCGAGGCGTT
GCCTATGTGG ATGGCGACGC GCGCCAACTG ATGCCTGCCC CCGTTGCCCA AGCCATCGAC
ACCACCGCTG CCGGCGATAC GTTTGTGGGC GCATTGGCTG CGGTTCTGGC AGAGGGCGCA
GCGCCCAGTG CCGCCATCGC GTTTGGGCAA GCTGCGGCGG CCGTGTCGGT CACGCGGCTT
GGCGCGCAGC CGTCCATTCC GTTCCGCAGC GAGTTGGGCG CACCGGCCGC GCCCGCACCT
CACTAG
 
Protein sequence
MVAKRPSASS AHPAADVLIV GSLNMDLVIR TPRLPRPGQT VAAPALETIP GGKGANQAVA 
AARLGARVAM LGCVGDDAYG TALREGLRRE GVDTSMVSVH AGAATGIACV TVANSGQNTI
VIVAGANEML TPTMIEAQRA AFERARVIVC QLESPPDAVE CALKLGQRLG KTVILNPAPA
IGPLPTPWLA ACDYLIPNET EAALLTARPV DSPEAALDAA ADLHAQGARH VIVTLGARGV
AYVDGDARQL MPAPVAQAID TTAAGDTFVG ALAAVLAEGA APSAAIAFGQ AAAAVSVTRL
GAQPSIPFRS ELGAPAAPAP H