| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0942 |
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| Symbol | |
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| ID | 8018574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 991822 |
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| End bp | 993906 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829721 |
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| Product | putative site-specific recombinase transmembrane protein |
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| Protein accession | YP_002980914 |
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| Protein GI | 241662554 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4389] Site-specific recombinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.145069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAT TTTTGCTTAG CCCGTGGCGC AAGTGGCGCG ATTCCCGGCA CGCCAGCCAT
CAACTCGATG CCATCCTGGC GCAGTTCGAG CCCACGCGCA GTCTCGCCGA ACGCAATGAA
TGGCTCATCG AGCTGGCTTA CTGGTTGCGC CGGGCGGACC GGCCAGCGGG GGCCGCATCG
GAGTCCTGGC GTTATGCCCG CCTGCGTTAT CTCCTGCAGG TGCTGGAAAA CAATCCGGCC
CTGGCAGAGC GTGTCGGGCG GACACTGCGC AGCATCGTGC AAGACAATGA TCCGGTGTCG
CTGCTGTGCG ATACGGGGTT GTCCTCACGC TCCGGTTTCT GGAGCGAGTT GCTCGACCGC
TGGCAGGCGC GTCTGCTGCC GCCCGCACCG AATCAGCCGC AGCTGGCGAC ATTGTTCGCG
CTCATGTTTG TCGGGCCGAC CGATGCGCAG TGGGTGGATG GCCTGGACGA CGAACTGGTC
GCGCGCCTCC ACGTGCTGTT CCGCGCGGGG ATGACCGCTG ACGAGCTCGC AGCGGGCCAG
ACACGGTTGG AGCGCAGCCT CGGCATCGGT ATCCAGATCC TGATCAGCCA GGTACGCGCG
GCGGGGCTGT CGCGGGGCAT CCGCAGCCGC ATGGACCATG CGGAAATCAC CGACTCTCCG
TTCTATCTGC TGGCCGATGC GGCCAACGCG ATCTTCCTGG AGCGACCCAA CGCGGAGCTG
GCAAGCCCCG AGCGGTTTCT GCAGGAACTG AACTATTTCC GCGCGGTGCT GGACCGTTGC
CGCACGGCGA CGGCCAGCGT GTATCAGCAT CTGGACGAGA ACGGCGTCTC GGTGGAGGTC
GTGTTCCAGG TCGAGCGCAT GAAGGCGTGG CTGGGCCGCA TCGATTTGCT GCTGACGGCG
TGGGCCGACG CCAAAGGCTC GCGCCGCTTC GTGCATATGA CGGCCGAATT GGTATCGGCG
AGCCAGCATC GCCGCAGCGT GGGGTATCTG ATCCGCTCCA CGTTTGCCGA TCTGGCACGC
AAGGTGGTCG AGCGGTCTGC CCAGAGCGGC GAGCACTACA TTACGCGCGA CAGCAAGGAA
TACGGCGCGA TGGTCAAGGC GGCGGCCGGT GGCGGCGTCA TCACGGCAGC GACGGTCTAC
ATCAAGTTCT TGATCACGGG CGCGCATCTG TCGCGCTTTA CCGAAGGGCT GTTTGCGTCG
ATCAACTATG CGGTCAGCTT TCTCGGCATC CATTTCGCGC ATTTCACCCT GGCGACCAAG
CAGCCTGCCA TGACGGCGCC CGCACTGGCG CACCGGCTCG ACCAGGTGGG CCGTCCGGAA
GGGCTGGACC GCTTTGTCGA CGACACCGTC GCCATGATCC GCTCCAACGC GGCGGCGATT
GCGGGCAACC TCGTGGCCGT GGCGCCGGTG GCCTTTCTGG TGCAGTGGTT GGCCGGGCGG
TTCTTCCATG CGGACCTGAT TTCGGCCGCA AAAGCGATGG CGACCATCGA TTCGTTTTCC
ATTCTTGGCC CGACGCCGCT GTATGCCATC TTCACAGGCG TTTTGCTGTG GGCGTCAAGC
CTGGCCGCGG GTTGGGCCGA CAACTGGTTT GCGCTGCACC GTGTGCACGA CGTGATTGCC
TACCACAGGC GCCTGCGTTT CATGGTCGGC CCGCAGGGGG CGCAACGCAT TGCCAGCTTC
TGGAAGCGCA ATCTGTCGGG CATCGTGGCC AATGTGTCGC TGGGCTTCAT GCTCGGGCTG
GGCCCAGAAA TCCTGTCGTT TTTCGGCCCG CATATGGAAG TGCGTCACGT CACGCTGTCA
ACCGGCGCGG TGGCTACCGC CGTGGGCGTG CTGGGGCCGA GCGTGATGCA TACCACTGCG
TTCTGGCTGG CCGTGGCCGG CATCGCGCTG ATGGGCGTAC TGAATGTGCT GGTGTCGTTC
GCGCTGGCGT TCAATATGGC GATGCGCTCG CGCAACCTGC GTGGGGTCGA TCGCAAGCGC
GTGACGGGCG CCGTGTGGCG CCGCATCCTG CGGGATCCGT TGTGCCTGCT CGTGCCGCGC
CCCCCGACTG CGAGCACACC CCCGAGCACC AGCACGCCGG TCTAG
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| Protein sequence | MFKFLLSPWR KWRDSRHASH QLDAILAQFE PTRSLAERNE WLIELAYWLR RADRPAGAAS
ESWRYARLRY LLQVLENNPA LAERVGRTLR SIVQDNDPVS LLCDTGLSSR SGFWSELLDR
WQARLLPPAP NQPQLATLFA LMFVGPTDAQ WVDGLDDELV ARLHVLFRAG MTADELAAGQ
TRLERSLGIG IQILISQVRA AGLSRGIRSR MDHAEITDSP FYLLADAANA IFLERPNAEL
ASPERFLQEL NYFRAVLDRC RTATASVYQH LDENGVSVEV VFQVERMKAW LGRIDLLLTA
WADAKGSRRF VHMTAELVSA SQHRRSVGYL IRSTFADLAR KVVERSAQSG EHYITRDSKE
YGAMVKAAAG GGVITAATVY IKFLITGAHL SRFTEGLFAS INYAVSFLGI HFAHFTLATK
QPAMTAPALA HRLDQVGRPE GLDRFVDDTV AMIRSNAAAI AGNLVAVAPV AFLVQWLAGR
FFHADLISAA KAMATIDSFS ILGPTPLYAI FTGVLLWASS LAAGWADNWF ALHRVHDVIA
YHRRLRFMVG PQGAQRIASF WKRNLSGIVA NVSLGFMLGL GPEILSFFGP HMEVRHVTLS
TGAVATAVGV LGPSVMHTTA FWLAVAGIAL MGVLNVLVSF ALAFNMAMRS RNLRGVDRKR
VTGAVWRRIL RDPLCLLVPR PPTASTPPST STPV
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