| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0941 |
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| Symbol | |
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| ID | 8018573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 989568 |
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| End bp | 991658 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829720 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002980913 |
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| Protein GI | 241662553 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0936229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TGAGCCAAGT CCCCAGCCCG CACGACGAGT CGAAGTTCGT GACTTTCGAG
GGCTCGCCGT TCCAGTTGTA CCAGCCGTAT CCGCCGGCCG GCGACCAGCC GGAAGCGATC
CGCCAGCTCG TCGAGAACAT CGAAGACGGG CTGTCGTACC AGACACTGCT GGGCGTGACG
GGCTCGGGTA AGACCTTCAC CATGGCCAAT GTGATCGCGC AGGTGGGGCG TCCGGCGATT
GTGTTTGCGC CGAACAAGAC CCTGGCGGCG CAGCTGTATT CCGAGTTCCG CGAGTTCTTC
CCGCGCAATG CAGTCGAGTA CTTCGTCTCT TACTACGACT ATTACCAGCC TGAGGCTTAT
GTGCCGCAGC GCGACCTGTT CATCGAAAAG GATTCGTCGA TCAACGAGCA CATCGAGCAG
ATGCGGCTCT CCGCCACCAA GAGCCTGCTG GAACGCCGCG ACGTGGTGAT CGTGGCCACC
GTGTCGGCCA TCTACGGTAT CGGCAACCCG AGCGAATACC ACCAGATGAT CTTGACGCTG
CGCGCCGGTG ACAAGGTCAG CCAGCGTGAC GTGATCGCGC GCCTGATCGC CATGCAGTAC
ACGCGCAACG AGACGGATTT CCAACGCGGC ACGTTCCGGG TGCGTGGCGA CACGGTCGAC
ATCTTCCCTG CCGAGCACGC AGAAATGGCG GTGCGCCTGG AGCTGTTCGA CGATGAAGTC
GAATCGCTGC AACTGTTCGA TCCGCTGACG GGCCGTGTGC GGCAAAAGAT TCCGCGCTTT
ACGGTGTACC CGTCGAGCCA CTACGTGACG CCGCGCGAGA CCGTGCTGCG CGCCATCGAG
ACCATCAAGG CCGAACTGCG CGAGCGGCTC GATTTCTTCT ACAAGGAAAA CAAGCTGGTG
GAAGCGCAGC GGCTGGAGCA GCGCACGCGC TTCGATCTGG AGATGCTGCA GGAGCTGGGC
TTCTGCAAGG GCATCGAGAA CTATTCGCGG CATCTGTCGG GTTCCGCGCC TGGCGAACCG
CCGCCGACGC TGGTCGATTA CCTGCCGCCC GATGCGCTGA TGTTCCTCGA TGAATCGCAC
GTGCTGATCG GGCAGCTGAA CGGCATGTAC AACGGTGACC GCGCGCGCAA GGAAACGCTG
GCCGAATACG GTTTCCGCTT GCCTTCTGCG CTCGACAACC GGCCGCTGAA GTTCGCCGAA
TTCGAGACCA AGATGCGGCA GGTGACGTTC GTGTCTGCCA CACCGGGGGA TTACGAAAAG
AAGACCGCCG GCACGGAAGT CGTGGAACAA GTCGTGCGCC CCACGGGCCT CGTCGATCCG
ATCATCGAGG TGCGCCCTGC CACGACGCAG GTCGACGATC TGCTCTCCGA GATCCATGTG
CGCGTCAAGG CTGGCGAGCG CGTGCTGGTG ACCACGCTGA CCAAGCGCAT GGCTGAGCAG
CTGACCGAGT TCCTGTCAGA GAACGGCATC AAGGTCCGCT ACCTGCATTC GGACATCGAT
ACCGTGGAGC GCGTGGAGAT CATCCGCGAC CTGCGTCTGG GGACGTTCGA TGTGCTGGTC
GGGATCAACC TGCTGCGCGA GGGCCTGGAT ATTCCCGAAG TGTCGCTCGT GGCGATCCTG
GATGCGGACA AGGAAGGCTT CCTCCGCGCC GAGCGTTCGC TTATCCAGAC GATTGGCCGC
GCCGCGCGGA ACGTGAACGG GACCGCCATT CTCTATGCGG ATCGCATGAC CGATTCAATG
AAGAAGGCGA TCGACGAAAC CGAACGCCGC CGCGCCAAGC AGATCGCCCA CAACGAGGCG
CATGGCATTA CGCCGCGCGG CGTGGTCAAG CGCATCAAGG ACATCATCGA CGGTGTGTAC
AACGTCGACG ATGCGCGCGC CGAGCTGAAG GCCGCGCAAG AGGCCGCCAA GTACGAAGAC
ATGAGCGAGA AGCAGGCGTC CAAGGAAATC AAGCGCCTGG AAAAACAGAT GCTCGACCAT
GCCAAGAACC TGGAATTCGA AAAGGCGGCG GCGGTGCGCG ATCAGCTTGC CAAGCTCAAG
TCGCAGCTCT TTGGGGCGAG CGGCGAAGAC CATATCGTTC CGGCCGCCTG A
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| Protein sequence | MTDLSQVPSP HDESKFVTFE GSPFQLYQPY PPAGDQPEAI RQLVENIEDG LSYQTLLGVT
GSGKTFTMAN VIAQVGRPAI VFAPNKTLAA QLYSEFREFF PRNAVEYFVS YYDYYQPEAY
VPQRDLFIEK DSSINEHIEQ MRLSATKSLL ERRDVVIVAT VSAIYGIGNP SEYHQMILTL
RAGDKVSQRD VIARLIAMQY TRNETDFQRG TFRVRGDTVD IFPAEHAEMA VRLELFDDEV
ESLQLFDPLT GRVRQKIPRF TVYPSSHYVT PRETVLRAIE TIKAELRERL DFFYKENKLV
EAQRLEQRTR FDLEMLQELG FCKGIENYSR HLSGSAPGEP PPTLVDYLPP DALMFLDESH
VLIGQLNGMY NGDRARKETL AEYGFRLPSA LDNRPLKFAE FETKMRQVTF VSATPGDYEK
KTAGTEVVEQ VVRPTGLVDP IIEVRPATTQ VDDLLSEIHV RVKAGERVLV TTLTKRMAEQ
LTEFLSENGI KVRYLHSDID TVERVEIIRD LRLGTFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNVNGTAI LYADRMTDSM KKAIDETERR RAKQIAHNEA
HGITPRGVVK RIKDIIDGVY NVDDARAELK AAQEAAKYED MSEKQASKEI KRLEKQMLDH
AKNLEFEKAA AVRDQLAKLK SQLFGASGED HIVPAA
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