| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0934 |
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| Symbol | |
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| ID | 8018566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 981101 |
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| End bp | 982942 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829713 |
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| Product | peptidase S10 serine carboxypeptidase |
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| Protein accession | YP_002980906 |
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| Protein GI | 241662546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0917831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCG TCACCCTGAA AAAGGCCATT ATCGCCATGA AAAAATCCAG GTTATCGACC
AGTGATTTTG CAGGTTTGTC CCGGACCCTT GGTGTATCGT TTGCGGCCGC GGCGCTGTCC
GCCGTGCTGC TGACGGGTTG CGGCGGCGGA GACTCGTCCG CCACGGCCAA CCCCAGCGGC
GTTGCCGCCA ACGCCGGCAA CGCAACCACA CAGCCGGTGA CGGCCGCCGT GCCGCCCGAC
CAGCCCTACG TCGACCCGAA CGTCTACGGC ACCGGGCCCA ACGACGCGCT TGCCGCCGAT
CCGGGCGAAA GCGCGGCCAT CACGCACCAT ACGGTGACAA TCGGCGGCAA GAGCATCGCC
TATACGGCCA CCGCGGGCCA CCTGACGACC ATCGACCCGA TCACGTCGCA ATCGAACGCG
ACGATGTTCT ACGTGGCCTA CACGCAAGAC AACCCCGATC CGGCAAAGCC ACGTCCGGTG
ACGTTCTTCT ATAACGGCGG CCCCGGCTCG TCGTCGGTGT TCCTGCTGCT GGGCTCGTTC
GGGCCGAAGC GGCTGCAGTC ATCGTTCCCG AATTTCACAC CGCCCGCACC GTACAAGTTG
CCCGACAACC CGGACAGCCT GCTCGACCGC TCCGATCTCG TGTTCATCAA CCCCGTGGGC
ACCGGATACT CGGCCGCGAT CGCCCCGGCC AAGAACAAAG ACTTCTGGGG CACCGACCAG
GACGCCCGCT CCATCGACCG CTTCATCCAG CGCTACCTGA CGAAGAACTC GCGCTGGAAT
TCGCCCAAGT TCCTGTATGG CGAGTCGTAT GGCACGGCGC GCAGTGCGGT GCTGTCATGG
GTGCTGCATG AAGACGGCAT CGAGCTGAAC GGGATCACGC TGCAATCGTC GATCCTCGAC
TACGCGAATG CGCTCTCGGC CGTCGGCACC TTCCCGACGC TGGCTGCCGA CGCCTTCTAC
TGGAAGAAGA CGACGCTCAA CCCGGCACCG ACGGACCTCG ACAGCTACAT GGTCCAGGCC
CGCAACTACG CCGACAACAC GCTCGCCCCG CTGGCACAAG CACCGAGCGC CGCAGATGGC
GGGTTCGTCA ACGTCCGCCT GAACCTGAAC CTGGCGACGG CGCAGACGAT GGGCTCGTAC
ATCGGCACCG ATCCGGTCTC GCTGATCCAG ACGTTCGGCA ACCCGGCGGC GCTGGGCAAC
GTGCCGTCGC AGAACAACAA CCCGCCGTAC ACGTTCTTCC TGACGCTCAA CCCGGGGATC
CAGATCGGCC AGTATGACGG CCGCGCCAAC TACACGGGCC AGGGCATTGC GCCGTTCATC
CTGCCGAACT CGGGCAGCAA CGATCCGTCG ATCTCGAATA TCGGGGGCGC GTATACGGTG
CTGTGGAACA GTTACCTGAA CACCCAGCTC AAGTACACGT CGACCTCCTC GTTCGTGGAC
CTGAACGACG CCGTGTTCAA CAACTGGAAC TTCAGTCACA TCGACCCGAC GGGTGCCAAC
AAGGGCGGCG GCAATACGCT GTACACGGCT GGCGACCTGG CCGCGACGAT GAGCCTGAAC
CCCGACCTGA AGGTGCTGCA GGCGAGCGGC TATTTCGACG CCGTCACGCC GTTCCACCAG
ACCGAGCTGA CGTTGGCGCA AATGCCGCTC GATCCGACGC TCAAGGCGAA GAACCTGACG
ATCAAGAACT ATCCGTCGGG CCACATGATC TATCTGAACG ATGCGTCGCG CACCGCACTC
AAGGGCGACC TGGCTTCGTT TTACGATGGC GTGATGGCCG ATCGTCCGGC GCTGATGCGG
GTGCAGAGCC TGCAACGCCT GCCGAGCGGC CCAAAGAAGT AA
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| Protein sequence | MAFVTLKKAI IAMKKSRLST SDFAGLSRTL GVSFAAAALS AVLLTGCGGG DSSATANPSG
VAANAGNATT QPVTAAVPPD QPYVDPNVYG TGPNDALAAD PGESAAITHH TVTIGGKSIA
YTATAGHLTT IDPITSQSNA TMFYVAYTQD NPDPAKPRPV TFFYNGGPGS SSVFLLLGSF
GPKRLQSSFP NFTPPAPYKL PDNPDSLLDR SDLVFINPVG TGYSAAIAPA KNKDFWGTDQ
DARSIDRFIQ RYLTKNSRWN SPKFLYGESY GTARSAVLSW VLHEDGIELN GITLQSSILD
YANALSAVGT FPTLAADAFY WKKTTLNPAP TDLDSYMVQA RNYADNTLAP LAQAPSAADG
GFVNVRLNLN LATAQTMGSY IGTDPVSLIQ TFGNPAALGN VPSQNNNPPY TFFLTLNPGI
QIGQYDGRAN YTGQGIAPFI LPNSGSNDPS ISNIGGAYTV LWNSYLNTQL KYTSTSSFVD
LNDAVFNNWN FSHIDPTGAN KGGGNTLYTA GDLAATMSLN PDLKVLQASG YFDAVTPFHQ
TELTLAQMPL DPTLKAKNLT IKNYPSGHMI YLNDASRTAL KGDLASFYDG VMADRPALMR
VQSLQRLPSG PKK
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