Gene Rpic12D_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0927 
Symbol 
ID8018559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp975711 
End bp976886 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content60% 
IMG OID644829706 
Producthypothetical protein 
Protein accessionYP_002980899 
Protein GI241662539 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.045473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.615211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCG ATTTCTTCTT CACGCTGCGG CACGCCAAGC TGCCGGTCTC GGTCAAGGAA 
TACCTAACGC TGCTGGAAGG GCTCAAGCAG CAGGTCATCG CGCCGTCGCT CGACGAGTTC
TACTTCCTGG CGCGCATGAC GCTGGTGAAG GACGAAAAGC ACTTCGACAA GTTTGACCAA
GCGTTCGGCG CCTACTTCAA GGGCGTGGAA GGTGCGGTCG ATTGGCGTGC GGACATTCCG
CTGGATTGGC TCACCAAGAA GCTGGAGCGC GAACTCTCGC CCGAGGAGAA AGCCAAGATC
GAGGCCATGG GCGGCCTCGA CAAACTGATG GAGCGGCTGA AAGAACTGCT GAACGAGCAG
CACGAGCGTC ACGAAGGCGG CAACAAGTGG ATCGGGACGG GTGGCACGTC GCCGTTCGGG
CACGGCGGTT ATAACCCCGA AGGCATACGC ATCGGCGGGC CATCGAAGGG CAACCGCACC
GCGGTCAAGG TGTGGGAAGC ACGCGCGTAC AAGGACTACG ACGACACCGT TGAACTCGGC
ACCCGCAACA TCAAGGTGGC GCTGCGCCGC CTGCGCAAGT TCGCGCGTGA TGGTGCCGAC
ATCGAGCTGG ACCTGGACGA CACCATCCAC TCCACCGCCG CCAACGCCGG CATGCTCGAC
ATCAAGATGC GCCCCGAGCG GCACAACAAC GTCAAGGTGC TGATGCTGAT GGATGTGGGC
GGCTCGATGG ACGACCACAT CAAGCGCGTG GAAGAACTCT TCTCCGCCGC CAAAACCGAG
TTCAAGCACC TCGAGTATTA CTACTTCCAC AACTGCGTCT ACGAATGGCT GTGGAAGAAC
AACCGCCGCC GTCATGCGGA GCGGTTCTCC ACCTGGGACG TCATCCGCAA GTACCCGCCC
GATTACAAGC TGATCTTTGT GGGTGACGCG ACCATGAGCC CGTATGAAAT CCTGCAGGCC
GGCGGCTCGG TGGAATACAA CAACGCCGAA GCCGGCGCCA CGTGGCTCAA GCGGTTGATC
GAACAGTTCC CGAAGTTTGT CTGGCTCAAC CCCGAGCCGG AGGGCCTGTG GGAATACCGG
CAGTCCATCT CGGTCATCAA CCAGATCATG AAGACGCGGA TGTATCCGGT GACGATTGCG
GGGTTGGAGT CCGCGATGAG GTTGTTGTCA AAGTAA
 
Protein sequence
MLIDFFFTLR HAKLPVSVKE YLTLLEGLKQ QVIAPSLDEF YFLARMTLVK DEKHFDKFDQ 
AFGAYFKGVE GAVDWRADIP LDWLTKKLER ELSPEEKAKI EAMGGLDKLM ERLKELLNEQ
HERHEGGNKW IGTGGTSPFG HGGYNPEGIR IGGPSKGNRT AVKVWEARAY KDYDDTVELG
TRNIKVALRR LRKFARDGAD IELDLDDTIH STAANAGMLD IKMRPERHNN VKVLMLMDVG
GSMDDHIKRV EELFSAAKTE FKHLEYYYFH NCVYEWLWKN NRRRHAERFS TWDVIRKYPP
DYKLIFVGDA TMSPYEILQA GGSVEYNNAE AGATWLKRLI EQFPKFVWLN PEPEGLWEYR
QSISVINQIM KTRMYPVTIA GLESAMRLLS K