Gene Rpic12D_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0921 
Symbol 
ID8018553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp971057 
End bp971554 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content64% 
IMG OID644829700 
ProductUracil-DNA glycosylase superfamily 
Protein accessionYP_002980893 
Protein GI241662533 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.299989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.705929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCA AGCGATGCTT TCCGCCCGTG GTCGACGCGC ACACGCGCGT GCTGATCCTG 
GGCAGCCTGC CCGGTGAAGC ATCGCTTGCG CAATCGCAGT ACTACGCACA CAAGCAGAAC
CAGTTCTGGC GCCTGGCCGG CGAGGTGATC GGCCAGGATT TACCGGGCAT GGAATACGCC
GCGCGTTTGC AGGTGCTGCT TGCGCATCGC ATCGGCCTGT GGGATGTGGT GGCCGAAGCC
AAGCGCGAAG GCAGTCTCGA CAGCAAGATC CGGGACCATG CCGGTAATGA CCTTGCCGGC
TTGATCGCCT CGTTGCCGGA ACTGGCGCTC ATTGCCTTTA ACGGCGGCAC CGCGTCGCGC
ATTGGCGTAA AGGCGCTGGG CGACATCGGC GACCGCCACA CCATCCTCAA ACTCCCTTCC
AGCAGTCCGG CCTATGCAGC CGTGCCGTAT GCCCAGAAGT TGGCGGCGTG GCTAGCGCTG
CGTGAGTGGC TGTCGTAG
 
Protein sequence
MTLKRCFPPV VDAHTRVLIL GSLPGEASLA QSQYYAHKQN QFWRLAGEVI GQDLPGMEYA 
ARLQVLLAHR IGLWDVVAEA KREGSLDSKI RDHAGNDLAG LIASLPELAL IAFNGGTASR
IGVKALGDIG DRHTILKLPS SSPAYAAVPY AQKLAAWLAL REWLS