Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0921 |
Symbol | |
ID | 8018553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 971057 |
End bp | 971554 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829700 |
Product | Uracil-DNA glycosylase superfamily |
Protein accession | YP_002980893 |
Protein GI | 241662533 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.299989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.705929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCTCA AGCGATGCTT TCCGCCCGTG GTCGACGCGC ACACGCGCGT GCTGATCCTG GGCAGCCTGC CCGGTGAAGC ATCGCTTGCG CAATCGCAGT ACTACGCACA CAAGCAGAAC CAGTTCTGGC GCCTGGCCGG CGAGGTGATC GGCCAGGATT TACCGGGCAT GGAATACGCC GCGCGTTTGC AGGTGCTGCT TGCGCATCGC ATCGGCCTGT GGGATGTGGT GGCCGAAGCC AAGCGCGAAG GCAGTCTCGA CAGCAAGATC CGGGACCATG CCGGTAATGA CCTTGCCGGC TTGATCGCCT CGTTGCCGGA ACTGGCGCTC ATTGCCTTTA ACGGCGGCAC CGCGTCGCGC ATTGGCGTAA AGGCGCTGGG CGACATCGGC GACCGCCACA CCATCCTCAA ACTCCCTTCC AGCAGTCCGG CCTATGCAGC CGTGCCGTAT GCCCAGAAGT TGGCGGCGTG GCTAGCGCTG CGTGAGTGGC TGTCGTAG
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Protein sequence | MTLKRCFPPV VDAHTRVLIL GSLPGEASLA QSQYYAHKQN QFWRLAGEVI GQDLPGMEYA ARLQVLLAHR IGLWDVVAEA KREGSLDSKI RDHAGNDLAG LIASLPELAL IAFNGGTASR IGVKALGDIG DRHTILKLPS SSPAYAAVPY AQKLAAWLAL REWLS
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