Gene Rpic12D_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0916 
Symbol 
ID8018548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp965229 
End bp965699 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID644829695 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002980888 
Protein GI241662528 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.139977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT CGCACGACGC TCAGGCCAAG CTCAAGCAAC TCGGCATCGA ACTGCCTGCC 
GCTGGCGCCC CCGCTGCCGC CTACGTCATG GCCGCGCAAA CCGGCAATCA GGTCTTCCTG
TCCGGCCACA TCGCCAAGAA AGACGGCAAG CCGTGGGTTG GCAAGCTGGG CGCCGACATG
ACCACCGAGC AAGGCAAGGC AGCGGCACGG GCCATCGCCA TCGACCTGAT CGCCACGCTG
AACACGCACC TGGGCGGTGA CCTCAGCCGC GTCAAGCGCA TCGTCAAGGT GATGAGCCTG
GTCAACTCCA CGCAGGAGTT CACTGAGCAG CACCTGGTGA CCAACGGCGC ATCGGAACTG
TTTGCCGACG TATTTGGCGA CGCCGGCAAG CACGCCCGCA GCGCCTTCGG CGTCGCACAG
ATTCCGTTCG GCGCGTGCGT CGAGATCGAG CTGATTGCGG AAGTCGCCTG A
 
Protein sequence
MTASHDAQAK LKQLGIELPA AGAPAAAYVM AAQTGNQVFL SGHIAKKDGK PWVGKLGADM 
TTEQGKAAAR AIAIDLIATL NTHLGGDLSR VKRIVKVMSL VNSTQEFTEQ HLVTNGASEL
FADVFGDAGK HARSAFGVAQ IPFGACVEIE LIAEVA